FC924929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924929 vs. ExPASy Swiss-Prot
Match: HFA4B_ORYSJ (Heat stress transcription factor A-4b OS=Oryza sativa subsp. japonica GN=HSFA4B PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.519e-24 Identity = 52/78 (66.67%), Postives = 61/78 (78.21%), Query Frame = 2 Query: 401 GGDSQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPD 634 GG SLP PFL+KTY++VDDPS D ++ W G++F+V EF RDLLPKYFKHNNFSSFVRQLNTYGFRKV P+ Sbjct: 3 GGGGGGSLP-PFLSKTYEMVDDPSTDAVVGWTPAGTSFVVANQPEFCRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPE 79
BLAST of FC924929 vs. ExPASy Swiss-Prot
Match: HFA4D_ORYSJ (Heat stress transcription factor A-4d OS=Oryza sativa subsp. japonica GN=HSFA4D PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.208e-24 Identity = 46/86 (53.49%), Postives = 64/86 (74.42%), Query Frame = 2 Query: 377 QTSESPATGGDSQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPD 634 ++S GG P PFL KTY++V+D + + +++W G++F+VW P +F+RDLLPKYFKHNNFSSF+RQLNTYGFRK+ P+ Sbjct: 2 ESSNLGGGGGGGGGGGPPPFLIKTYEMVEDAATNHVVSWGPGGASFVVWNPLDFSRDLLPKYFKHNNFSSFIRQLNTYGFRKIDPE 87
BLAST of FC924929 vs. ExPASy Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.414e-24 Identity = 48/84 (57.14%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 383 SESPATGGDSQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPD 634 S + +GG+ P PFL KTY++VDD S D +++W+++ ++FIVW AEF+R LLP YFKHNNFSSF+RQLNTYGFRK+ P+ Sbjct: 8 SSASVSGGEGAGG-PAPFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPE 90
BLAST of FC924929 vs. ExPASy Swiss-Prot
Match: HSFB3_ARATH (Heat stress transcription factor B-3 OS=Arabidopsis thaliana GN=HSFB3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.097e-23 Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 2 Query: 425 PTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKV 625 P PFL KTY++V+DP+ D +I+WN G+ F+VW+PAEFARDLLP FKH NFSSFVRQLNTYGFRKV Sbjct: 38 PPPFLVKTYKVVEDPTTDGVISWNEYGTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLNTYGFRKV 104
BLAST of FC924929 vs. ExPASy Swiss-Prot
Match: HFA4C_ARATH (Heat stress transcription factor A-4c OS=Arabidopsis thaliana GN=HSFA4C PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.097e-23 Identity = 52/78 (66.67%), Postives = 64/78 (82.05%), Query Frame = 2 Query: 401 GGDSQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPD 634 GG S SLP PFLTKTY++VDD S D ++AW+ + +FIV PAEF+RDLLP++FKH NFSSF+RQLNTYGFRKV P+ Sbjct: 6 GGSS--SLP-PFLTKTYEMVDDSSSDSVVAWSENNKSFIVKNPAEFSRDLLPRFFKHKNFSSFIRQLNTYGFRKVDPE 80
BLAST of FC924929 vs. ExPASy Swiss-Prot
Match: HFA2E_ORYSJ (Heat stress transcription factor A-2e OS=Oryza sativa subsp. japonica GN=HSFA2E PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.672e-23 Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 425 PTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPD 634 P PFLTKTY +VDDP+ D +++W++ ++F+VW P F LLP+YFKHNNFSSFVRQLNTYGFRKV PD Sbjct: 36 PPPFLTKTYDMVDDPTTDAVVSWSATNNSFVVWDPHLFGNVLLPRYFKHNNFSSFVRQLNTYGFRKVDPD 105
BLAST of FC924929 vs. ExPASy Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 4.672e-23 Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 371 VEQTSESPATGGDSQRSLPTP------FLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPD 634 +E ES + + S+P P FL+KTY +VDDP +++++W+S ++F+VW EF++ LLPKYFKHNNFSSFVRQLNTYGFRKV PD Sbjct: 1 MESVPESVPSPNSNTPSIPPPVNSVPPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLNTYGFRKVDPD 94
BLAST of FC924929 vs. ExPASy Swiss-Prot
Match: HFA2C_ORYSJ (Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica GN=HSFA2C PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.359e-22 Identity = 47/70 (67.14%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 425 PTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPD 634 P PFLTKTY LV+DP+ D +++W+ G++F+VW P FA LLP+ FKHNNFSSFVRQLNTYGFRKV PD Sbjct: 40 PPPFLTKTYDLVEDPATDGVVSWSRAGNSFVVWDPHVFADLLLPRLFKHNNFSSFVRQLNTYGFRKVDPD 109
BLAST of FC924929 vs. ExPASy Swiss-Prot
Match: HFA2D_ORYSJ (Heat stress transcription factor A-2d OS=Oryza sativa subsp. japonica GN=HSFA2D PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.319e-22 Identity = 50/92 (54.35%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 359 PMAPVEQTSESPATGGDSQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPD 634 P +P E + P G P PFLTKT+ LV DP+ D +++W GS+F+VW P FA LP++FKHNNFSSFVRQLNTYGFRK+ PD Sbjct: 15 PSSPEEGEAPRPMEG--LHEVGPPPFLTKTFDLVADPATDGVVSWGRAGSSFVVWDPHVFAAVFLPRFFKHNNFSSFVRQLNTYGFRKIDPD 104
BLAST of FC924929 vs. ExPASy Swiss-Prot
Match: HSFA3_ARATH (Heat stress transcription factor A-3 OS=Arabidopsis thaliana GN=HSFA3 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.165e-22 Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 431 PFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPD 634 PFL+KT+ LVDDP++D +I+W G++F+VW P EFAR +LP+ FKHNNFSSFVRQLNTYGFRK+ D Sbjct: 55 PFLSKTFDLVDDPTLDPVISWGLTGASFVVWDPLEFARIILPRNFKHNNFSSFVRQLNTYGFRKIDTD 122 The following BLAST results are available for this feature:
BLAST of FC924929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924929 ID=FC924929; Name=FC924929; organism=Citrus clementina; type=EST; length=634bpback to top |