FC924931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 4.577e-12 Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 516 + KR+ KE K + +PP SA P E++ W I GP +P+ G + + FP +YPFKPP ++ T R N +CL D + W+PA +++ +L + S +T Sbjct: 6 SQKRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITPNGR--FACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMT 116
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.807e-12 Identity = 42/126 (33.33%), Postives = 60/126 (47.62%), Query Frame = 1 Query: 184 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPL 540 M K ++ E+ +L+ + P +C + H + P + Y GG F I P Y PPKV TK++ PNI G ICL +L+E W+P T+ V+ + SL TD N DPL Sbjct: 32 MRDKLLVTEVAELEANLPWTCKVHFPDPNKLHCFQLTVSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTGWAPTRTLKDVVWGLNSLFTDLLNFYDPL 157
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UB2J2_MOUSE (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.271e-11 Identity = 34/117 (29.06%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 528 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T R N +CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGR--FKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UB2J2_HUMAN (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 2.271e-11 Identity = 34/117 (29.06%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 528 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T R N +CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGR--FKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UB2J2_BOVIN (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.271e-11 Identity = 34/117 (29.06%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 528 A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T R N +CL D + W+PA ++S +L + S + + P Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGR--FKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127 The following BLAST results are available for this feature:
BLAST of FC924931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924931 ID=FC924931; Name=FC924931; organism=Citrus clementina; type=EST; length=544bpback to top |