FC924931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 8.004e-41 Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 543 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPFKPPKV FRT+++ NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 8.004e-41 Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 543 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPFKPPKV FRT+++ NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 8.004e-41 Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 543 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPFKPPKV FRT+++ NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.787e-32 Identity = 63/117 (53.85%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A KR++ + K LQKDPP S P ++ HW A I GP D+P+ GG F +T+HF DYP KPP V F +++F PNI ++GSICLDIL+ QWSP ++ VL SI SLL DPNPD P Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.334e-32 Identity = 58/117 (49.57%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 + KRI +E+ +L DPP CSAGP ++++HW ATI+GPS +PY GG+F + I FP DYPFKPPK+ F+T+++ N+++ G + ++IL++ WSPALTI+KVL +I S+ P P P Sbjct: 37 SGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSP 153
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 8.302e-30 Identity = 57/117 (48.72%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K LQ+DPPT S P ++ W A I GP D+P+ G F +TI F +YP KPP V F +KVF PN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P Sbjct: 5 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.416e-29 Identity = 56/99 (56.57%), Postives = 73/99 (73.74%), Query Frame = 1 Query: 247 SAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 543 S G + +++ W A I GP +PY GG+F ++I FP DYPFKPPK F+T ++ PNIN GSIC++ILK++W+PAL + KVLLSI LL PNPDDPLV Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLV 126
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.416e-29 Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +T+ F DYP KPP V F +++F PNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.850e-29 Identity = 61/116 (52.59%), Postives = 80/116 (68.97%), Query Frame = 1 Query: 193 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 +RI+KE + L +P SA P E+M ++ I+GP+ SPY GGVF + + P +YP PKV F TK++ PNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.850e-29 Identity = 57/117 (48.72%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +++ F DYP KPP V F +++F PNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121 The following BLAST results are available for this feature:
BLAST of FC924931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924931 ID=FC924931; Name=FC924931; organism=Citrus clementina; type=EST; length=544bpback to top |