FC924931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.850e-29 Identity = 57/117 (48.72%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +++ F DYP KPP V F +++F PNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.155e-29 Identity = 57/117 (48.72%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A KR++++ K LQ DPP S P ++ W A I GP D+P+ GG F +++ F DYP KPP V F +++F PNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P Sbjct: 5 ARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.120e-29 Identity = 60/116 (51.72%), Postives = 80/116 (68.97%), Query Frame = 1 Query: 193 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 +RI+KE + L +P SA P ++M ++ I+GP+ SPY GGVF + + P +YP PKV F TK++ PNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 2.045e-28 Identity = 60/116 (51.72%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 193 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 KRI+KE + L +P SA P ++ +++ I GP DSP+ GGVF + + DYP PKV F TK++ PNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL Sbjct: 6 KRIIKETQRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.671e-28 Identity = 59/116 (50.86%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 193 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 KRI+KE + L DP +A P +++ ++Q TI GP SPY G+F + ++ P DYP + PKV F TK++ PNI+ G ICLD+LK WSPAL I VLLSI +LL PNP+DPL Sbjct: 6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPL 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.556e-28 Identity = 60/119 (50.42%), Postives = 81/119 (68.07%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 A KR+ KE+ D+ K PP+ CSA V +++ W+AT+ GP SP+ GVF + I P DYPFKPP + F TK++ PNI S+G+IC ++ WSP L I VL +I S+LTDPNPD+PL Sbjct: 3 AHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFST-WSPQLKILDVLTTIRSILTDPNPDNPL 120
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.556e-28 Identity = 56/120 (46.67%), Postives = 81/120 (67.50%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLTDPNPDDPLV 543 +S+R+ KE DL++ P V +++FHW T +GPSDS YAGG F ++ FP DYPF+PP + F T+++ PN +S G++CL ILK+Q + P++ + VL I LL +PNPDDPLV Sbjct: 8 SSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLV 127
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.950e-28 Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F +TI F +YP KPP V F +K+F PN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P Sbjct: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 5.950e-28 Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F +TI F +YP KPP V F +K+F PN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P Sbjct: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.950e-28 Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K +Q DPP SA PVA+++ W A I+GP+D+P+ G F + +HF YP KPP V F +++F PN+ G +CLDIL+ +WSP ++ +L SI SLL DPN P Sbjct: 5 ARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSP 121 The following BLAST results are available for this feature:
BLAST of FC924931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924931 ID=FC924931; Name=FC924931; organism=Citrus clementina; type=EST; length=544bpback to top |