FC924931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.950e-28 Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K +Q DPP SA PVA+++ W A I+GP+D+P+ G F + +HF YP KPP V F +++F PN+ G +CLDIL+ +WSP ++ +L SI SLL DPN P Sbjct: 5 ARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.771e-28 Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + I F +YP KPP V F +K+F PN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.771e-28 Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + I F +YP KPP V F +K+F PN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.771e-28 Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + I F +YP KPP V F +K+F PN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.771e-28 Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + I F +YP KPP V F +K+F PN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.771e-28 Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + I F +YP KPP V F +K+F PN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.325e-27 Identity = 52/117 (44.44%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 + KR++++ K L DPP S P A+++ W A I GP+D+P+ G F + + F YP KPP V F +K+F PN+ +NG +CLDIL+ +WSP ++ +L SI SLL DPNP+ P Sbjct: 5 SKKRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLHDPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.325e-27 Identity = 50/115 (43.48%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 193 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 +R++++ K LQ+DPP S P +++ W+A I GP ++P+ G F +++ F +YP KPP V F +K+F PN+ ++GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.731e-27 Identity = 51/117 (43.59%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K +Q DPP SA P+ +++ W A I+GP+D+P+ G F + + F YP KPP+V F +++F PN+ +NG +CLDIL+ +WSP ++ VL SI SLL DPN P Sbjct: 5 ARRRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQMFHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.731e-27 Identity = 50/117 (42.74%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K +Q+DPP+ SA P+ +++ W A I+GPSD+P+ G F + + F YP KPP+V F +++F PN+ ++G +CLDIL+ +WSP +S +L S+ SLL DPN P Sbjct: 5 ARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSP 121 The following BLAST results are available for this feature:
BLAST of FC924931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924931 ID=FC924931; Name=FC924931; organism=Citrus clementina; type=EST; length=544bpback to top |