FC924931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 8.591e-27 Identity = 57/118 (48.31%), Postives = 81/118 (68.64%), Query Frame = 1 Query: 190 SKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 +KRI+KE++ ++ DP + V+E D+ H + T +GP +PY GG F+V I P +YPFKPPK+ F TKV+ PNI+S G+ICLDILK WSP +T+ L+S+ +LL P P+DP Sbjct: 4 AKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 56/116 (48.28%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 193 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++ PN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 56/116 (48.28%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 193 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++ PN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 56/116 (48.28%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 193 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++ PN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 56/116 (48.28%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 193 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++ PN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 56/116 (48.28%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 193 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++ PN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 49/117 (41.88%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K +++D P SA P+ +++ W A I+GP+D+PY G F + + F +YP KPP V F +++F PN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P Sbjct: 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 49/117 (41.88%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K +++D P SA P+ +++ W A I+GP+D+PY G F + + F +YP KPP V F +++F PN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P Sbjct: 5 ARRRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 49/117 (41.88%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K +++D P SA P+ +++ W A I+GP+D+PY G F + + F +YP KPP V F +++F PN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P Sbjct: 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.914e-26 Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 190 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 SKR+ EL +L P SA P +++F+W TI G D+ Y F +++ FP DYP+KPP V F T+ F PN+++NG+ICLDILK++WSP + +L+SI SLL +PN + PL Sbjct: 8 SKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPL 124 The following BLAST results are available for this feature:
BLAST of FC924931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924931 ID=FC924931; Name=FC924931; organism=Citrus clementina; type=EST; length=544bpback to top |