FC924931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.914e-26 Identity = 49/117 (41.88%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K +Q+D P+ SA P+ +++ W A I+GP+D+P+ G F + + F YP KPP V F +++F PN+ ++G +CLDIL+ +WSP +S +L SI SLL DPN P Sbjct: 5 AKRRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.241e-25 Identity = 56/127 (44.09%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPN 525 A KR+LKEL+ L KD P AGP +E+ +F W I GP D+PYA GVF + FP DYP PPK+ F + PNI NG +C+ IL +E+WSP ++ K+LLS+ S+L++PN Sbjct: 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPN 131
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.714e-25 Identity = 50/117 (42.74%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 187 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 A +R++++ K L D P S P +++ W A I GP ++P+ G F +T+ F YP KPP V F +K+F PNI +NG +CLDIL+ +WSP ++ +L S+ SLL DPNP P Sbjct: 5 AKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.050e-24 Identity = 57/116 (49.14%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 196 RILKELKDLQKDPPTS-CSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 537 RI KEL+D +++ +S P ++++ TI GP +PY GG F + I P YPF+PPK+ F TKV+ PNI+S +G+ICLDILK+QWSPALT+ L+SI +LL+ P P DP Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDP 121
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.991e-24 Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 196 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLV 543 R+ +EL+ L K+PP +M +A I+G S SPY GG+F + I P YPF+PPK+ F T ++ PNI+S G ICLDIL K W PAL IS VL SI L+++PNPDDPL+ Sbjct: 6 RLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLM 125
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 8.891e-24 Identity = 52/118 (44.07%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 196 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 R+ KE K++Q++ + +D +F W A I GPS++PY GGVF + P YP +PP+V F TK+F PN++ G ICLDILK WSPA T+ V +I +L+ P PD PL Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPL 124
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.587e-23 Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 178 RVMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 R SKR+ +EL+ L +A P +++F W AT+ GP D+ Y + +T+ FP DYP+KPP V F T + PN++ +G+ICLDILKE W+ + + +LLS+ SLL +PN PL Sbjct: 28 RHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPL 148
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 3.378e-23 Identity = 49/132 (37.12%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 178 RVMASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPD 531 + MA +R++KE K+L ++ P +AGP ED F W I GP +P+ GG++ T+ FP DYP PP + F + F PN+ +G++C+ IL E+WSP ++ K+LLS+ S+L +PN + Sbjct: 3 KAMALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDE 134
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.378e-23 Identity = 52/118 (44.07%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 190 SKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 540 +KR+ EL L S SA PV + D+ +W I GP D+PY+G F V++ FP +YPF PP + F + ++ PN++ +G+ICLDILKE+WS + +LLS+ SLL +PN PL Sbjct: 10 TKRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPL 127
BLAST of FC924931 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23 Identity = 51/132 (38.64%), Postives = 80/132 (60.61%), Query Frame = 1 Query: 187 ASKRIL-KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFRPNINSNGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDP 537 AS+++L K+LK++QK+PP S G V + +F W+ I+GP D+ Y GG F T+ FP DYP PPK+ F T+++ PN++ NG +C+ IL E+W P + +L+S+ S+L+ PN + P Sbjct: 5 ASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESP 136 The following BLAST results are available for this feature:
BLAST of FC924931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924931 ID=FC924931; Name=FC924931; organism=Citrus clementina; type=EST; length=544bpback to top |