FC924938
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: CAIE_SALHS (Carnitine operon protein caiE OS=Salmonella heidelberg (strain SL476) GN=caiE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.358e-13 Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 PVV D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H TI+ +N +GH A+LHGC V +A VGM + + D Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMD 105
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: CAIE_SALG2 (Carnitine operon protein caiE OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=caiE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.358e-13 Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 PVV D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H TI+ +N +GH A+LHGC V +A VGM + + D Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMD 105
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: CAIE_SALEP (Carnitine operon protein caiE OS=Salmonella enteritidis PT4 (strain P125109) GN=caiE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.358e-13 Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 PVV D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H TI+ +N +GH A+LHGC V +A VGM + + D Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMD 105
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: CAIE_SALDC (Carnitine operon protein caiE OS=Salmonella dublin (strain CT_02021853) GN=caiE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.358e-13 Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 PVV D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H TI+ +N +GH A+LHGC V +A VGM + + D Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMD 105
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: CAIE_SALA4 (Carnitine operon protein caiE OS=Salmonella agona (strain SL483) GN=caiE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.358e-13 Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 PVV D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H TI+ +N +GH A+LHGC V +A VGM + + D Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMD 105
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: UMP6_ARATH (Uncharacterized protein At1g47420, mitochondrial OS=Arabidopsis thaliana GN=At1g47420 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.080e-13 Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 79 MGTLGKAIYSVGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLR 336 MGTLG+AI++VG IR T QA R+G LQG+++ ++ LSRHRTL+ + AP+AS+IGDVQ+ +GS I Y V R Sbjct: 1 MGTLGRAIHTVGNRIRGTAQAQARVGSLLQGSHHIEKHLSRHRTLITV-------------APNASVIGDVQINKGSFISYASVSR 73
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: CAIE_SALCH (Carnitine operon protein caiE OS=Salmonella choleraesuis GN=caiE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.962e-13 Identity = 41/101 (40.59%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 PVV D F+ PSA +IGDV VG G I LRGD + +G+N+QD ++H TI+ +N +GH A+LHGC V +A VGM + + D Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRQILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMD 105
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: CAIE_SHIDS (Carnitine operon protein caiE OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=caiE PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.529e-12 Identity = 40/101 (39.60%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 PVV F+ PSA +IG V VG G I LRGD + + +G NIQD ++H TI+G+N +GH A+LHGC + +A VGM + + D Sbjct: 11 PVVHPTAFVHPSAVLIGYVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMD 105
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: CAIE_SALPB (Carnitine operon protein caiE OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=caiE PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.608e-12 Identity = 40/101 (39.60%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 PVV D F+ PSA +IGDV VG G I LRGD + + +G+N+Q ++H TI+ +N +GH A+LHGC V +A VGM + + D Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQYGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMD 105
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: CAIE_CITK8 (Carnitine operon protein caiE OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiE PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.608e-12 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 PVV + ++ PSA +IGDV VG G I LRGD + + +G N+QD ++H TI+ +N +GH A+LHGC + +A VGM + + D Sbjct: 11 PVVHPEAYVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGANLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVIGRDALVGMNSVIMD 105 The following BLAST results are available for this feature:
BLAST of FC924938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924938 ID=FC924938; Name=FC924938; organism=Citrus clementina; type=EST; length=539bpback to top |