FC924941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.103e-22 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 108 LIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENI-EKVLDRGEKI 569 +IYS VARG+ +LAE+T GNF +I + L +P + K +Y + + F+YLV + TY +A E GR+IP FL+ VK F Y G K TA+A +N +F L+ M + + + +++ A++ EVK +++ +I ++L RGEKI Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKI 155
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.209e-22 Identity = 56/156 (35.90%), Postives = 99/156 (63.46%), Query Frame = 3 Query: 105 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPAT-NNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 S++Y+ VARGTV+LAE + + N ++IA Q L+K+P ++ +Y+ D + F+ +G T +A E AGR+IP +FLE + + F + YG +A A +N EF L + ++Y + P ++++K ++++V+ VM+ENI+ +LDRGE++ Sbjct: 2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSNDP-NADTISRIKGEMNQVRDVMIENIDNILDRGERL 155
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.474e-22 Identity = 53/155 (34.19%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 105 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R +FL VK+ F Y G +A TA+ +N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KSLDKVMETQAQVDELKGIMVRNIDLVAQRGERL 154
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.150e-22 Identity = 56/157 (35.67%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 105 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ +N EF S L ++Y H E ++A+ +AQV E+KG+M+ NI+ V RGEK+ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKL 154
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22 Identity = 52/155 (33.55%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 105 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL VK+ F Y G +A TA+ +N EF S L +++ ++ + + ++ + +AQV E+KG+M+ NI+ V RGE++ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERL 154
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 2.717e-21 Identity = 52/155 (33.55%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 105 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ +N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERL 154
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.717e-21 Identity = 52/155 (33.55%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 105 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ +N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERL 154
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 6.052e-21 Identity = 52/155 (33.55%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 105 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ +N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERL 154
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.181e-16 Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 93 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 M Q ++Y+ V+ V L E+ GNF +A + + K+P T+ K Y + H F+Y+ EN + + E G QIP FL +++ F + YG + + + F L+E M+Y +P+ +K+ V QVSE KG + + IEK + RGEKI Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISENDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYD-PFIRVLEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKI 155 The following BLAST results are available for this feature:
BLAST of FC924941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924941 ID=FC924941; Name=FC924941; organism=Citrus clementina; type=EST; length=575bpback to top |