FC924946

Overview
NameFC924946
Unique NameFC924946
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3654 contig Ccv1_Contig3654:2..649. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.215e-67
Identity = 111/207 (53.62%), Postives = 151/207 (72.95%), Query Frame = 2
Query:    2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQM 622
            R+P Y  VR  FT   A +LG++FWD+GSK   SQDL   MG++++A +FLG+   SSVQP+VS+ERTVFYREKAAGMY+ +P+A AQ ++EIPYI  Q+++Y VI Y  +G++ T  KF  Y  FM++T   FTFYGM+ V +TPN H+AA++S+ FY +W L  GF++ +P IPVWW W+Y+  PVAWTL G+I SQ GDVE  +
Sbjct: 1166 RSPEYNLVRLVFTTIAAFILGTVFWDIGSKRTSSQDLITVMGALYSACLFLGVSNASSVQPIVSIERTVFYREKAAGMYAPIPYAAAQGLVEIPYILTQTILYGVITYFTIGFERTFSKFVLYLVFMFLTFTYFTFYGMMAVGLTPNQHLAAVISSAFYSLWNLLSGFLVQKPLIPVWWIWFYYICPVAWTLQGVILSQLGDVESMI 1372          

HSP 2 Score: 68.9366 bits (167), Expect = 2.502e-11
Identity = 37/163 (22.70%), Postives = 79/163 (48.47%), Query Frame = 2
Query:  125 GSMFTAIIFLGLQYCS----SVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601
            G+ + + +F GL +      S  P++     VFY+++    +    W++A  ++ +PY  +++VV+  +VY  +G   +A +F  Y   ++    +      +  ++  +  IA    +    I +L  GFVIP+  I  WW W +W +P+++    +  ++F
Sbjct:  563 GNEYLSCLFFGLVHMMFNGFSELPLMISRLPVFYKQRDNSFHPAWSWSIASWLLRVPYSVLEAVVWSGVVYFTVGLAPSAGRFFRYMLLLFSVHQMALGLFRMMASLARDMVIANTFGSAAILIVFLLGGFVIPKADIKPWWVWGFWVSPLSYGQRAIAVNEF 725          
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: PDR13_ORYSJ (Pleiotropic drug resistance protein 13 OS=Oryza sativa subsp. japonica GN=PDR13 PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.308e-60
Identity = 103/210 (49.05%), Postives = 148/210 (70.48%), Query Frame = 2
Query:    2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQA---MIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQM 622
            R+P Y  VR FFT+  A++ GS+FW++G K   ++D+   MG+++ A +FLG+   SSVQPVVSVERTV+YRE+AA MYS  P+A AQ    ++EIPYI VQ++++ +I Y M+ Y+    K   Y  +M++T   FTFYGM+ V +TP  H+A++VS+ FY +W L  GF+IP+ RIP WW W+Y+  PVAWTL G+I SQ GDV+ ++
Sbjct: 1178 RSPEYNVVRLFFTSVAAIIFGSIFWNVGMKRESTEDILLLMGALYAACLFLGVNNASSVQPVVSVERTVYYRERAANMYSSFPYAAAQVYHGLVEIPYIAVQTLIFGLITYFMVNYERNIRKLVLYLIYMFLTFTYFTFYGMVAVGLTPTQHMASVVSSAFYSLWNLLSGFLIPQSRIPGWWIWFYYICPVAWTLRGVITSQLGDVDTRI 1387          

HSP 2 Score: 74.7146 bits (182), Expect = 4.560e-13
Identity = 54/208 (25.96%), Postives = 101/208 (48.56%), Query Frame = 2
Query:   26 RFFFT------AFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGL---QYCSSVQPVVSVERT-VFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGM------LTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601
            RF +T      AF+ ++  +LF          Q+     G+++ A +F GL    +    +  +++ R  VFY+++    +    ++L   ++ IPY F+++VV+  +VY  +G+  T ++F   F FM   LLLF+ + M      +  AI  +  IA+   +      +L  GFV+P+  I  WW W YW +P+ +    +  ++F
Sbjct:  522 RFLYTFRTCQVAFVGIITSTLFLRTRLHPVDEQN-----GNLYLACLFFGLVHMMFNGFTEMTMTISRLPVFYKQRDNFFHPAWAFSLPNWILRIPYSFIEAVVWSCVVYYTVGFAPTVDRF---FRFM---LLLFSIHQMALGLFRMMGAIARDMTIASTFGSAVLLAIFLLGGFVVPKGFIKPWWDWAYWISPLMYAQRAVSVNEF 718          
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.310e-57
Identity = 97/202 (48.02%), Postives = 135/202 (66.83%), Query Frame = 2
Query:    2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGD 607
            ++P Y A+R+  T    ++ G++FW  G       DL N +G+ + A+ FLG     ++ PVVSVERTVFYREKAAGMYS L +A AQ  +E  Y  VQ V+Y +++Y+M+GY+W A+KF ++ FFM      FT + M+ VA T +  +AA++ +     W  F GF+IPRP IPVWWRW+YWANPV+WT+YG+IASQF D
Sbjct: 1192 KDPPYNAMRYVMTLLYGLVFGTVFWRRGKNIESVNDLNNLLGATYAAVFFLGAANLLTLLPVVSVERTVFYREKAAGMYSPLSYAFAQGFVEFCYSAVQGVLYTILIYSMIGYEWKADKFFYFLFFMIAAFAYFTLFSMMLVACTASEMLAAVLVSFVLSSWNNFAGFIIPRPLIPVWWRWFYWANPVSWTIYGVIASQFAD 1393          

HSP 2 Score: 68.1662 bits (165), Expect = 4.268e-11
Identity = 45/199 (22.61%), Postives = 94/199 (47.24%), Query Frame = 2
Query:   29 FFFTAFIAVLLGSLFWDMGSKTR----KSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTA----EKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601
            F F AF   +LG +   +  +T+    K  D    +G++  ++I +       +Q  +  +  +FY+++    +    + LA  ++++P   ++S ++ V+ Y ++G+   A    ++F  YF+   + L LF   G +  ++   +     V  L +    LF GF++ R  I  WW W YW +P+ ++   L  ++F
Sbjct:  542 FIFKAFQLFVLGFITMTLFLRTKMPHEKFSDTSKYVGALTASLITIMFNGFGELQLTID-KLPIFYKQRDFLFFPAWTYGLANIILKVPLSLMESSLWIVLTYYVVGFAPAAGRFFKQFLAYFWTHQMALALFRLLGAILRSMVVANTFGMFVLLLIF----LFGGFLVSRKDIKPWWIWGYWTSPMMYSNNALSVNEF 735          
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.940e-57
Identity = 97/207 (46.86%), Postives = 136/207 (65.70%), Query Frame = 2
Query:    2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQM 622
            RNP Y   R  F +F  +L G LFW    +    QDLFN  GSMFT ++F G+  CS+V   V+ ER VFYRE+ + MY+   ++LAQ ++EIPY   QS+VY +IVY M+GY W+  K  W F+ ++ TLL+F ++GML V +TPN HIA  + + FY I  LF G+V+P+P IP WW W Y+ +P +W L GL+ SQ+GD+E ++
Sbjct: 1132 RNPSYNLTRIIFMSFTCMLCGILFWQKAKEINNQQDLFNVFGSMFTVVLFSGINNCSTVLFSVATERNVFYRERFSRMYNSWAYSLAQVLVEIPYSLFQSIVYVIIVYPMVGYHWSVFKVFWSFYSIFCTLLIFNYFGMLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEKEI 1338          

HSP 2 Score: 73.559 bits (179), Expect = 1.016e-12
Identity = 43/194 (22.16%), Postives = 95/194 (48.97%), Query Frame = 2
Query:   29 FFFTAFIAVLLGSLFWDMGSKTRKSQDLFNA---MGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601
            + F + + + +G +   +  +T  ++D  +A   MGS+F ++  L       +   +S    VF ++K    Y    +A+  A+++IP  F++S ++ ++ Y ++GY     +F   F  ++   L          A+  +  +A  V ++   +  +F GF++ +P +P W  W +W +P+++   GL A++F
Sbjct:  511 YVFKSGLLIFIGFIAMTVYLRTGSTRDSLHANYLMGSLFFSLFKLLADGLPELTLTIS-RIAVFCKQKELYFYPAWAYAIPSAILKIPISFLESFLWTMLTYYVIGYSPEMGRFIRQFLILFALHLSCISMFRAIAAVFRDFVVATTVGSISIVLLSVFGGFIVRKPSMPSWLEWGFWLSPLSYAEIGLTANEF 703          
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 8.776e-57
Identity = 96/207 (46.38%), Postives = 142/207 (68.60%), Query Frame = 2
Query:    2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQM 622
            R+P Y  +R     F +++ G LFWD G K    Q +F+  G+MFTA+IF G+   SSV P V+ ER+V YRE+ AGMY+   +ALAQ  IEIPY+  Q++ + VI Y M+GY W+A K  WYF+ M+ TLL FT+ GM+ V++TP+  +AAI+ + FY ++ LF GF++P+ +IP WW W+Y+  P +WTL G++ SQ+GD+E ++
Sbjct: 1187 RSPSYNLMRSLHMLFASLVSGLLFWDKGKKLDNQQSVFSVFGAMFTAVIFCGINNSSSVLPYVTTERSVLYRERFAGMYASWAYALAQVAIEIPYLLAQALAFTVITYPMIGYYWSAYKVFWYFYSMFCTLLYFTYLGMMLVSMTPSFPVAAILQSSFYTMFNLFAGFLMPKAQIPKWWIWFYYLTPTSWTLNGMLTSQYGDIEKEI 1393          

HSP 2 Score: 73.559 bits (179), Expect = 1.016e-12
Identity = 46/198 (23.23%), Postives = 95/198 (47.98%), Query Frame = 2
Query:   29 FFFTAFIAVLLGSLFWDMGSKTRKSQDLFNA---MGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYI----TLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601
            + F      ++ S+   +  +TR   DL +A   +G++F A+I L +     +   ++    VFY++     Y    + +   +++IP   ++SV++  + Y ++G+   A +F      ++     ++ +F F   +   I  +   A  +S LF      F GF+IPRP +P+W +W +W +P+ +   GL  ++F
Sbjct:  543 YIFKTVQLAIIASITMTVFLRTRMDTDLVHANYYLGALFYALIILLVDGFPELSMTIT-RLAVFYKQSELCFYPAWAYTIPATILKIPLSLLESVIWASMTYYVIGFSPEAGRFFRQLLLLFAVHMTSISMFRFLASVCRTIVAST-AAGGLSILFV---LCFSGFIIPRPSMPIWLKWGFWISPLTYGEIGLAVNEF 735          
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: AB38G_ARATH (ABC transporter G family member 38 OS=Arabidopsis thaliana GN=ABCG38 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.497e-56
Identity = 100/212 (47.17%), Postives = 143/212 (67.45%), Query Frame = 2
Query:    2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQMKNGET 637
            RN  Y AVRF F A + ++ G +FW +G +    QD+FN++G+M T + FL  Q  ++V+PVV  ERTVFYRE  AGMYS LP+A +Q +IEIPY   Q+ +Y VIVY M+GY+WTA KF    FF +I++L   + G++ ++++PN  IA+I++ +    W +F GF IPRPR+ VW RW+ +  P  W LYGL  +Q+GDVE ++  GET
Sbjct: 1161 RNVPYNAVRFSFGAAVGIMYGIIFWSLGKRKGTRQDIFNSVGAMSTVVGFLSSQSAATVRPVVIAERTVFYREAGAGMYSALPYAFSQVIIEIPYTMAQACIYGVIVYGMIGYEWTASKFFLNIFFTFISILYSIYTGIMVISVSPNQEIASILNGVISTSWNVFSGFTIPRPRMHVWLRWFTYVCPGWWGLYGLTIAQYGDVETRLDTGET 1372          

HSP 2 Score: 70.8626 bits (172), Expect = 6.585e-12
Identity = 46/189 (24.34%), Postives = 87/189 (46.03%), Query Frame = 2
Query:   50 AVLLGSLFWDMGSKTRKSQDLFNAMGSMFTA---IIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGML--TVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601
            A+L+G +FW   +     +D    MG+++     I+F G        P+   +  VFY+++    Y    ++L  ++I  P  FV+  +  +I Y  +GYD T   F  +  ++ + L     YG+     A+T NH ++  +  L       F G+V+ R ++  W  W YW +P+ +    +  ++F
Sbjct:  528 AILIGVVFWQQKNYPSTVEDGIIYMGAIYLEVQMIVFSGFFEL----PMTIDKLPVFYKQRHFSFYPSWAFSLPTSIITFPLSFVEVFIVVLITYFTIGYDLTVPSFLKH--YLVLALCGQMSYGLFRCIAAVTRNHVVSNTMGCLAVMWLMTFSGYVLSRNQVHKWLTWAYWTSPMMYIQTAVSVNEF 710          
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.214e-55
Identity = 94/207 (45.41%), Postives = 134/207 (64.73%), Query Frame = 2
Query:    2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQM 622
            RNP Y   R  F  F  +L G LF     +    QDLFN  GSMFT ++F G+  CS+V   V+ ER VFYRE+ + MY+   ++LAQ ++EIPY   QS++Y +IVY M+GY W+  K  W F+ ++ +LL+F ++GML V +TPN HIA  + + FY I  LF G+V+P+P IP WW W Y+ +P +W L GL+ SQ+GD+E ++
Sbjct: 1130 RNPSYNLTRIIFMCFTCMLCGILFLQKAKEINNQQDLFNVFGSMFTVVLFSGINNCSTVIFCVATERNVFYRERFSRMYNPWAYSLAQVLVEIPYSLFQSIIYVIIVYPMVGYHWSVYKVFWSFYSIFCSLLIFNYFGMLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEKEI 1336          

HSP 2 Score: 75.0998 bits (183), Expect = 3.491e-13
Identity = 44/194 (22.68%), Postives = 97/194 (50.00%), Query Frame = 2
Query:   29 FFFTAFIAVLLGSLFWDMGSKTRKSQDLFNA---MGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601
            + F + + + +GS+   +  +T  ++D  +A   MGS+F ++I L       +   VS    VF ++K    Y    +A+  A+++IP  F++S ++ ++ Y ++GY   A +F      ++   L          A+  +  +A  + ++   +  +F GF++ +P +P W  W +W +P+++   GL +++F
Sbjct:  509 YVFKSGLLIFIGSIAMTVYLRTGSTRDSLHANYLMGSLFFSLIKLLADGLPELTLTVS-RIAVFCKQKELYFYPAWAYAIPSAILKIPISFLESFLWTMLTYYVIGYSPEAGRFIRQVLILFALHLSCISMFRAIGAVFRDFDVATTIGSISIVLLSVFGGFIVRKPSMPSWLEWGFWLSPLSYAEIGLTSNEF 701          
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.797e-49
Identity = 84/207 (40.58%), Postives = 131/207 (63.29%), Query Frame = 2
Query:    2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQM 622
            RNP +   R  F    ++L   LFW         QDLF+  GSM+T +IF G+  C++V   ++ ER VFYRE+ A MYS   ++ +Q ++E+PY  +QS++  +IVY M+GY  +  K  W  + ++ +LL+F + GML VA+TPN H+A  + + F+ +  LF GFV+P+ +IP WW W Y+ +P +W L GL++SQ+GDVE ++
Sbjct: 1137 RNPSHNLTRIVFILLNSLLCSLLFWQKAKDINNQQDLFSIFGSMYTIVIFSGINNCATVMNFIATERNVFYRERFARMYSSWAYSFSQVLVEVPYSLLQSLLCTIIVYPMIGYHMSVYKMFWSLYSIFCSLLIFNYCGMLMVALTPNIHMALTLRSTFFSMVNLFAGFVMPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVEKEI 1343          

HSP 2 Score: 69.707 bits (169), Expect = 1.467e-11
Identity = 48/186 (25.81%), Postives = 86/186 (46.24%), Query Frame = 2
Query:   44 FIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601
            F A++  ++F   G+ TR ++     MGSMFTA+  L       +   +S    VF ++K    Y    +A+   ++ IP   + S ++ V+ Y ++GY     +F  +F  +    L          +I       +I   +   +  LF GFVIP+  +P W  W +W +P+++   GL A++F
Sbjct:  518 FNALVTMTVFLQAGA-TRDARHGNYLMGSMFTALFRLLADGLPELTLTIS-RLGVFCKQKDLYFYPAWAYAIPSIILRIPLSVLDSFIWTVLTYYVIGYSPEVGRFFRHFIILLTFHLSCISMFRAIASICRTFVACSITGAISVLLLALFGGFVIPKSSMPTWLGWGFWLSPLSYAEIGLTANEF 701          
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: AB33G_ARATH (ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 84/213 (39.44%), Postives = 132/213 (61.97%), Query Frame = 2
Query:    2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQMKN-GET 637
            R+P Y  +R   T   + + G LFW+ G K    Q+LF  +G+++  ++F+G+  C+S       ER V YRE+ AGMYS   +ALAQ + EIPYIF+QS  + +++Y M+G+  +  K  W  + M+  LL F +  M  ++ITPN  +AAI+ +LF+  + +F GF+IP+P+IP WW W+Y+  P +WTL    +SQ+GD+  ++   GET
Sbjct: 1153 RSPSYNLMRIGHTFISSFIFGLLFWNQGKKIDTQQNLFTVLGAIYGLVLFVGINNCTSALQYFETERNVMYRERFAGMYSAFAYALAQVVTEIPYIFIQSAEFVIVIYPMIGFYASFSKVFWSLYAMFCNLLCFNYLAMFLISITPNFMVAAILQSLFFTTFNIFAGFLIPKPQIPKWWVWFYYITPTSWTLNLFFSSQYGDIHQKINAFGET 1365          

HSP 2 Score: 78.1814 bits (191), Expect = 4.124e-14
Identity = 52/196 (26.53%), Postives = 95/196 (48.47%), Query Frame = 2
Query:   29 FFFTAFIAVLLGSLFWDMGSKTRKSQDLFNA---MGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLT-VAITPNHHIAAIVSTLFYG-IWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601
            + F  F  VL   +   +  +TR   D+ +    M  +F A + L +     +   V    +VFY++K    Y    +A+   +++IP  F +S+V+  + Y ++GY  T E + ++  FM +  + FT   M   +A      +AA+ +  F   I ++F GF IP   +P W +W +W NP+++   GL  ++F
Sbjct:  510 YLFKTFQLVLAAIITMTVFIRTRMDIDIIHGNSYMSCLFFATVVLLVDGIPELSMTVQ-RLSVFYKQKQLCFYPAWAYAIPATVLKIPLSFFESLVWTCLTYYVIGY--TPEPYRFFRQFMILFAVHFTSISMFRCIAAIFQTGVAAMTAGSFVMLITFVFAGFAIPYTDMPGWLKWGFWVNPISYAEIGLSVNEF 702          
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.270e-47
Identity = 83/207 (40.10%), Postives = 129/207 (62.32%), Query Frame = 2
Query:    2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQM 622
            RNP +   R  F    + L G LFW         QDL +  GSM+T ++F G+  C++V   ++ ER VFYRE+ A MYS   ++ +Q +IE+PY  +QS++  +IVY  +GY  +  K  W  + ++ +LL+F + GML VA+TPN H+A  + + F+ +  LF GFVIP+ +IP WW W Y+ +P +W L GL++SQ+GDV+ ++
Sbjct: 1140 RNPSHNITRIVFILLDSTLCGLLFWQKAEDINNQQDLISIFGSMYTLVVFPGMNNCAAVINFIAAERNVFYRERFARMYSSWAYSFSQVLIEVPYSLLQSLLCTIIVYPTIGYHMSVYKMFWSLYSIFCSLLIFNYSGMLMVALTPNIHMAVTLRSSFFSMLNLFAGFVIPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVDKEI 1346          

HSP 2 Score: 68.9366 bits (167), Expect = 2.502e-11
Identity = 48/200 (24.00%), Postives = 89/200 (44.50%), Query Frame = 2
Query:    2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601
            RN      +     F A++  ++F  +G+ T      +  MGS+FTA+  L       +   +S    VF ++K    Y    +A+   +++IP   + S ++ ++ Y ++GY    ++F   F  +    L          AI      + I   +   +  LF GFVIP+  +P W  W +W +P+++   GL A++F
Sbjct:  507 RNSFIYLFKSALLVFNALVTMTVFLQVGATTDSLHGNY-LMGSLFTALFRLLADGLPELTLTIS-RLGVFCKQKDLYFYPAWAYAIPSIILKIPLSVLDSFIWTLLTYYVIGYSPEVKRFFLQFLILSTFNLSCVSMFRAIAAIFRTIIASTITGAISILVLSLFGGFVIPKSSMPAWLGWGFWLSPLSYAEIGLTANEF 704          
The following BLAST results are available for this feature:
BLAST of FC924946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
AB31G_ARATH3.215e-6753.62ABC transporter G family member 31 OS=Arabidopsis ... [more]
PDR13_ORYSJ1.308e-6049.05Pleiotropic drug resistance protein 13 OS=Oryza sa... [more]
PDR5_ORYSJ2.310e-5748.02Pleiotropic drug resistance protein 5 OS=Oryza sat... [more]
AB42G_ARATH3.940e-5746.86ABC transporter G family member 42 OS=Arabidopsis ... [more]
PDR3_TOBAC8.776e-5746.38Pleiotropic drug resistance protein 3 OS=Nicotiana... [more]
AB38G_ARATH1.497e-5647.17ABC transporter G family member 38 OS=Arabidopsis ... [more]
AB43G_ARATH8.214e-5545.41ABC transporter G family member 43 OS=Arabidopsis ... [more]
AB41G_ARATH8.797e-4940.58ABC transporter G family member 41 OS=Arabidopsis ... [more]
AB33G_ARATH3.343e-4839.44ABC transporter G family member 33 OS=Arabidopsis ... [more]
AB30G_ARATH1.270e-4740.10ABC transporter G family member 30 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP6YO04FM1 TF Citrus clementina cDNA clone KN0AAP6YO04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924946 ID=FC924946; Name=FC924946; organism=Citrus clementina; type=EST; length=648bp
GCGAAATCCACATTACACTGCTGTTAGATTCTTTTTTACAGCCTTTATAG
CAGTGTTGCTTGGGTCATTGTTTTGGGACATGGGCTCTAAAACGAGAAAG
AGCCAAGATCTGTTTAATGCAATGGGTTCCATGTTTACTGCAATTATCTT
CCTCGGCCTTCAATATTGTTCATCCGTGCAGCCAGTAGTATCTGTTGAAA
GGACAGTCTTTTACAGAGAAAAAGCCGCTGGCATGTACTCGGGCCTTCCG
TGGGCATTAGCACAAGCCATGATTGAGATTCCTTATATATTTGTTCAGTC
AGTAGTGTACTGTGTTATAGTCTATGCTATGATGGGATATGACTGGACAG
CCGAGAAGTTCTCTTGGTATTTTTTCTTCATGTACATCACATTATTGCTC
TTCACCTTCTATGGCATGTTGACAGTGGCTATAACACCAAACCACCACAT
TGCTGCCATTGTTTCGACTTTATTTTACGGGATATGGTACCTCTTTTGCG
GATTTGTAATCCCAAGACCTAGGATTCCTGTATGGTGGAGATGGTACTAT
TGGGCAAATCCTGTAGCTTGGACCCTGTATGGATTGATTGCTTCACAGTT
TGGGGATGTGGAGGACCAAATGAAAAATGGTGAAACAGCGAAACACTT
back to top