FC924949

Overview
NameFC924949
Unique NameFC924949
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 64/213 (30.05%), Postives = 109/213 (51.17%), Query Frame = 1
Query:   55 ADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFR--DCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKH-NERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRV 684
            A YG H+  +R++ +            + IR+DE+  M+  + R    +N      +++L   LS ++FNNI R+V GKR+   +    E+   FK ++ +          A+Y P L+ +F  + EK VK   +  D + + ++ E    R K G     H + +L   Q EY  +D  I GL+ +M++AG +T+ +T+EWAMA L++NP V
Sbjct:  115 APYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESNDFTHIELEPLLSDLTFNNIVRMVTGKRYYGDDVNNKEEAELFKKLVYDIAMYSGANHSADYLPILK-LFGNKFEKEVKAIGKSMDDILQRLLDE--CRRDKEGNTMVNHLI-SLQQQQPEY-YTDVIIKGLMMSMMLAGTETSAVTLEWAMANLLRNPEV 322          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 66/232 (28.45%), Postives = 112/232 (48.28%), Query Frame = 1
Query:   25 LSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYV--KHNERRDKLTKTIMAEHTLARQKG----GGAAKPHFVDALLNLQE----EYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            +S +  D++ + YG ++ ++RK+S           + R IRE+EV   ++SI        K+G  + L   +S + +   TR   G++        N+   EF  +L    K  A   +A+  P L+++  +   KY   K +++ D + +TI+  H     K      G  K   VD LLN+Q     E  L D  I  +++N+  AG +T++ TV+WAM E+IKNP V +
Sbjct:  104 VSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSI------GSKEGTRINLSKEISLLIYGITTRAAFGEK--------NKNTEEFIRLLDQLTKAVAEPNIADMFPSLKFLQLISTSKYKIEKIHKQFDVIVETILKGHKEKINKPLSQENGEKKEDLVDVLLNIQRRNDFEAPLGDKNIKAIIFNIFSAGTETSSTTVDWAMCEMIKNPTVMK 321          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 69/239 (28.87%), Postives = 116/239 (48.54%), Query Frame = 1
Query:   22 RLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFR-DCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRF---MSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWM--FPLEEEKYVKHNERRDKLTKTIMAEHTLARQKG-----GGAAKPHFVDALLNLQEEYELS-----DDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            RL  +  D+ +A YG ++ ++R +            + R +RE+E + MVE I +   T P      + L D L+ ++ +   R+ LGK++    + +G  + + ++ K++    V LG    L EY PWL W   F   + +  + +   D+    ++ EH +  ++      G      FVD LL  Q E E S     D TI  ++ +M +AG DTT   +EWA++ELIKNPR  +
Sbjct:  102 RLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQLQKTTPTAA---VNLTDLLTCLTNDVFCRIALGKKYGGTTTGDGEYHVRSLK-KNLAEFYVLLGIS-PLWEYIPWLEWTRRFDGVDRRIEEVSRTFDEFLGKVIQEHRVRDKREDTTVVGDTVGLDFVDLLLQFQRENERSSSPVDDLTIKAVILDMFLAGTDTTVTALEWALSELIKNPRAMK 335          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16
Identity = 61/228 (26.75%), Postives = 114/228 (50.00%), Query Frame = 1
Query:   16 ALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVK--HNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYE---LSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRV 684
            A  ++ N +D+++A YGP +  +RK+S               +R +E+  M++S+F    +    G+ + + D L+    N I +++L KR    +G   ++  EFK+++   + +     + ++ P + WM     EK +K  H +  D LTK        + ++ G   KP F+D ++  ++  E   LS   I  LL N+  AG DT++  +EWA+ E++KNP +
Sbjct:  109 ATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMF----DASHVGERIVVADMLTFAMANMIGQVMLSKRVFVEKG---KEVNEFKNMVVELMTVAGYFNIGDFIPQIAWMDLQGIEKGMKKLHKKFDDLLTKMFEEHEATSNERKG---KPDFLDFIMANRDNSEGERLSITNIKALLLNLFTAGTDTSSSVIEWALTEMMKNPTI 326          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16
Identity = 60/225 (26.67%), Postives = 112/225 (49.78%), Query Frame = 1
Query:   16 ALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERR-DKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYE---LSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNP 678
            A  L+ N +D+++ADYGP +  +RK+S               +R+ E+  M+ ++        + GQ + + + L+    N + +++L KR    +G    +  EFKD++   + +     + ++ P + WM     +  +K   ++ D L   ++ EHT +  +  G+  P F+D ++  ++  E   L    I  LL NM  AG DT++  +EWA+AEL+KNP
Sbjct:  110 ATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAM----AESGRHGQPVVVSEMLTYAMANMLGQVMLSKRVFGSQG---SESNEFKDMVVELMTVAGYFNIGDFIPSIAWMDLQGIQGGMKRLHKKFDALLTRLLEEHTASAHERKGS--PDFLDFVVANRDNSEGERLHTVNIKALLLNMFTAGTDTSSSVIEWALAELLKNP 325          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16
Identity = 60/225 (26.67%), Postives = 111/225 (49.33%), Query Frame = 1
Query:   16 ALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERR-DKLTKTIMAEHTLARQKGGGAAKPHFVDALL---NLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNP 678
            A  L+ N +D+++ADYGP +  +RK+S               +R+ E+  M+ ++        + GQ + + + L+    N + +++L KR    +G    +  EFKD++   + +     + ++ P + WM     +  +K   ++ D L   ++ EHT +  +  G+  P F+D ++   +  E   L    I  LL NM  AG DT++  +EWA+AEL+KNP
Sbjct:  110 ATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAM----AESGRHGQPVVVSEMLTYAMANMLGQVMLSKRVFGSQG---SESNEFKDMVVELMTVAGYFNIGDFIPSIAWMDLQGIQGGMKRLHKKFDALLTRLLEEHTASAHERKGS--PDFLDFVVANGDNSEGERLQTVNIKALLLNMFTAGTDTSSSVIEWALAELLKNP 325          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16
Identity = 60/227 (26.43%), Postives = 112/227 (49.34%), Query Frame = 1
Query:   43 DLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKY-VKH-NERRDKLTKTIMAEHTLARQK-----GGGAAKPHFVDALLNLQE----EYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            D+ +A YG ++ ++RK+ T          +   IR+DE   +++SI     +P      + L   L ++    ++R   GK         N+   EF  ++   + +     + +  P L+ +  L  +K  V+H ++R DK+ + I+ +H   R +     G  A +   VD LL L+E    E  ++ + I  ++WN+  AG DT+  T+EWAM+E++KNP+V++
Sbjct:  118 DIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSSAGSP------IDLSGKLFSLLGTTVSRAAFGKE--------NDDQDEFMSLVRKAITMTGGFEVDDMFPSLKPLHLLTRQKAKVEHVHQRADKILEDILRKHMEKRTRVKEGNGSEAEQEDLVDVLLRLKESGSLEVPMTMENIKAVIWNIFAAGTDTSASTLEWAMSEMMKNPKVKE 330          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16
Identity = 57/226 (25.22%), Postives = 109/226 (48.23%), Query Frame = 1
Query:   40 KDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPH---FVDALLNLQE----EYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            KD+ ++ +G ++ +VR +            + R +RE+E   M+E I + C         + L ++L  ++ N  +R+ LG+ +        E GI+ KDIL   ++L     + +Y PWL+W+  +   + K  K  ++ D    +++ EH +  +K   A       FVD LL +Q     ++ L  D++  +L +   AG DT    ++W MA++++ PR  +
Sbjct:  117 KDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCD-----ASVINLGEHLCFLTNNITSRVALGRTYDE-----RESGIDAKDILEQFLQLLDTFNVGDYIPWLKWVNKITGLDTKVEKIAKKLDTFLDSVIEEHIIRNKKEEYAITDEAKDFVDVLLEIQNGKETDFPLQRDSLKAILLDAFAAGTDTIYTNLDWTMADVLRQPRAMK 332          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16
Identity = 59/228 (25.88%), Postives = 113/228 (49.56%), Query Frame = 1
Query:   22 RLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFR--DCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPL--EEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLL-WNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            ++ R G+D+ +A YG ++ +++ +            + + IREDE+  M+E +     C+ P      + L      ++ + I R  LG+++ S      E GI+ ++I+     L     + EY P L W+  +  ++ K  + ++R D+  + ++ EH  A +      +   VD LL +Q     SD + + L+ W+M +AG  T+   +EWAM EL++NP+V +
Sbjct:  108 KILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSP----VNLSQLFMTLTNDIICRAALGRKYSS-----KEDGIDVENIVRAFSALVGEFPIGEYIPSLSWIDKIRGQDHKMEEVDKRFDEFLERVVKEHEDANKD----TRSDLVDTLLTIQ-----SDKSALKLIIWDMFLAGTATSLSFLEWAMTELMRNPKVMK 317          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16
Identity = 59/231 (25.54%), Postives = 115/231 (49.78%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEE----YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNP 678
            RS+   +L    +++  A YG ++ +++ VS           + + +R++E+T M+E+I +  + P      + L   LS+++ + I R+ LG+++    GV    G +FK+++   ++     T+  Y PWL W   +   E +  K     DKL + I+ +H     + G   K  FVD LL  Q +    +++   +I  ++ +  + G DT++  VEW M EL+++P
Sbjct:   98 RSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSKP------VNLSKILSSLTNDVICRVALGRKY----GV----GTDFKELIDRLMRQLGTFTIGSYVPWLAWTDWVSGLEARLEKTANDFDKLLERIVQDH-----EDGDGDKTDFVDVLLAAQRDKSFGFDIDRLSIKAIVLDAFVGGTDTSSTLVEWEMTELLRHP 309          
The following BLAST results are available for this feature:
BLAST of FC924949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
C81F1_ARATH3.452e-1730.05Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71DC_CATRO7.690e-1728.45Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71A6_NEPRA7.690e-1728.87Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C75A2_SOLME1.004e-1626.75Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C75A5_EUSGR1.312e-1626.67Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A7_EUSGR1.713e-1626.67Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71D8_SOYBN2.237e-1626.43Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71A4_SOLME2.237e-1625.22Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71AJ_ARATH3.817e-1625.88Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH8.502e-1625.54Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YO07FM1 TF Citrus clementina cDNA clone KN0AAP6YO07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924949 ID=FC924949; Name=FC924949; organism=Citrus clementina; type=EST; length=691bp
CGCAGAAGTAGACCTGCTCTTAGGCTTTCTAGAAATGGAAAAGACCTTAT
TTGGGCTGACTATGGTCCTCATTATGTTAAGGTTAGAAAAGTTTCTACTC
TTGAGCTTCTGTCTTCCAAAAAGCTTGAGGCCCTTAGGCCAATTAGGGAA
GATGAAGTCACTGCCATGGTTGAATCCATCTTTAGAGACTGCACTAACCC
AGAGAAAAAGGGGCAGAATATGAAACTGAGGGATTACTTGTCAGCAGTAT
CATTCAACAACATTACAAGACTTGTTCTTGGAAAGCGATTTATGAGCCCA
GAAGGTGTACTGAACGAGCAAGGTATTGAGTTCAAGGACATTCTTGGAAA
TGGAGTCAAGCTCGGGGCTCCTGTAACATTAGCAGAATACACTCCATGGC
TAAGATGGATGTTTCCACTAGAGGAAGAGAAATATGTGAAGCACAATGAA
CGCAGAGATAAGCTTACGAAAACCATAATGGCAGAACATACCCTTGCTCG
TCAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCTCA
ATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCTACTT
TGGAACATGATAATAGCAGGCATGGACACCACAACAATAACTGTAGAATG
GGCCATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAA
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