FC924949

Overview
NameFC924949
Unique NameFC924949
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15
Identity = 62/242 (25.62%), Postives = 126/242 (52.07%), Query Frame = 1
Query:    7 SRPAL----RLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHT----LARQKGGGAAKPHFVDALLNLQEEY------ELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            SRP+L    +LS N  D+ ++ +  ++ ++RK+            +++PI+E E+  +++SI    +        + L D   +++ N I + V G  F     VLN    +F+D++   +++    + +++ P++ W+     + +   + RR++  + + A +     L  QK    ++  FVD LL L++E       +L+ + I  +L N+++ G++T+ IT+ WAMAELI+NPRV +
Sbjct:   96 SRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTL----VNLSDTFLSLNVNVICKAVFGVNFQGT--VLNND--KFQDLVHEALEMLGSFSASDFFPYVGWIV----DWFTGLHARRERSVRDLDAFYEQMIDLHLQKNREESEDDFVDLLLRLEKEEAVLGYGKLTRNHIKAILMNILLGGINTSAITMTWAMAELIRNPRVMK 325          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15
Identity = 55/229 (24.02%), Postives = 111/229 (48.47%), Query Frame = 1
Query:   22 RLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEE----YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            ++   G+D+ +A YG ++ +++ +            +   IRE+E+  M+E + +   +      N  L   L  ++ + I R+ LG+++        + GI+ ++I+     L     + EY P L W+  +   + K    ++R D+  + ++ EH  A ++     +   VD LL +Q +    +EL    +  ++W+M +AG  TT   +EWAM EL++NP+V +
Sbjct:  107 KILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVN--LSQILMTLTNDIICRVALGRKYSG-----KKDGIDVENIVRTFAALLGEFPVGEYIPSLSWIDRIRGLDHKMEVVDKRFDEFLERVVKEHEEADKE----TRSDLVDKLLTIQSDKTGQFELEKSALKLIIWDMFLAGTATTLSFLEWAMTELMRNPKVMK 324          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15
Identity = 62/230 (26.96%), Postives = 112/230 (48.70%), Query Frame = 1
Query:   22 RLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWM--FPLEEEKYVKHNERRDKLTKTIMAEHTLARQK----GGGAAKPHFVDALLNLQE----EYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPR 681
            RLS   KD+ ++ +G ++ + + ++           + R +R +E   M+  I + C +       + L ++L +++ N I+R+ LG+ +        E GIE   I+   V+L     + +Y P L W+  F   + K  K  +  D   + ++ EH + ++K      G AK  FVD LL +Q     ++ L  D++  +L +   AG DTT  T++W MAEL++ PR
Sbjct:  112 RLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSV-----INLGEHLCSLTNNIISRVALGRTYDE-----KESGIEH--IIEQFVELLGIFNVGDYIPRLEWVNKFTGLDAKVKKVAKELDMFLEIVIEEHIIRKKKEEYTSTGEAKD-FVDVLLEIQNGNETDFPLQRDSLKAILLDSFAAGTDTTFATLDWTMAELLRQPR 328          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15
Identity = 57/224 (25.45%), Postives = 111/224 (49.55%), Query Frame = 1
Query:   16 ALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERR-DKLTKTIMAEHTLARQKGGGAAKPHFVDALL---NLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKN 675
            A  L+ N +D+++A YGP +  +RK+S               +R+ E+  M++++F    N E     + + + L+    N +++++L +R  + +G  +    EFKD++   +       + ++ P + WM     E  +K   ++ D L   ++ +H    Q+     KP F+D ++   +  +   L+ D I  LL N+  AG DT++  +EWA+AEL+KN
Sbjct:  114 ATHLAYNAQDMVFAHYGPKWKLLRKLSNLHMLGGKALENWADVRKTELGYMLKAMFESSQNNEP----VMISEMLTYAMANMLSQVILSRRVFNKKGAKSN---EFKDMVVELMTSAGYFNIGDFIPSIGWMDLQGIEGGMKRLHKKFDVLLTRLLDDHKRTSQER--KQKPDFLDFVIANGDNSDGERLNTDNIKALLLNLFTAGTDTSSSIIEWALAELLKN 328          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15
Identity = 55/214 (25.70%), Postives = 107/214 (50.00%), Query Frame = 1
Query:   61 YGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNE--QGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKH-NERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQE---EYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRV 684
            YG H+  +R+++           +   IR DE   ++  +  D +        M+L   L  ++FNNI R++ GKR+   +   ++  +  +F+D++   ++L       ++ P LR++     EK +K  + + D   + ++ EH   +++         +D LLNLQ+   EY  +D  I GL   M++AG D++ +T+EW+M+ L+ +P V
Sbjct:  120 YGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRLADDSST---NFAEMELSSRLYDMTFNNIMRMISGKRYYGEDCDTSDLQEASQFRDMVSELLQLSGANNKTDFMPLLRFLDFENLEKRLKDISGKTDAFLRGLIEEHRTKKERANT-----MIDHLLNLQDSQPEY-YTDQIIKGLALAMLLAGTDSSAVTLEWSMSNLLNHPEV 324          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 59/220 (26.82%), Postives = 106/220 (48.18%), Query Frame = 1
Query:   34 NGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQE---EYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRV 684
            N  ++I A YG H+  +R++ T              +R DEV  ++  + R       K   ++L+  L  ++FNNI R++ GKR+   E    E+    + ++ +     +     +Y P LR +F   E +  K  E  DK  + ++ +     ++G        +D LL LQ+   EY  +D  I G++  M+IAG +T+ +T+EWA++ L+ +P V
Sbjct:  119 NNTNMIAAPYGDHWRNLRRLCTIEIFSTHRLNCFLYVRTDEVRRLISRLSRLAGT---KKTVVELKPMLMDLTFNNIMRMMTGKRYYGEETTDEEEAKRVRKLVADVGANTSSGNAVDYVPILR-LFSSYENRVKKLGEETDKFLQGLIDD-----KRGQQETGTTMIDHLLVLQKSDIEY-YTDQIIKGIILIMVIAGTNTSAVTLEWALSNLLNHPDV 328          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 56/222 (25.23%), Postives = 109/222 (49.10%), Query Frame = 1
Query:   43 DLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEE--EKYVKHNERRDKLTKTIMAEHTL-ARQKGGGA--AKPHFVDALLNLQ-----EEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNP 678
            D+ ++ YG ++ +VRK+            +L PIRE+EV  +++ I        ++G  + L   + ++ F   +R   GKR+M  E        EF   +   +KL     +A+  P  +W+  L     K+   +++ D++ +TI+ +H   +R K G     +   +D LL  +     +++ L+   I  +L+++ IAG +T+  T+ W MAE++K+P
Sbjct:  102 DIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRI------ASEEGSVVNLSQAIDSLIFTITSRSAFGKRYMEQE--------EFISCVREVMKLAGGFNIADLFPSAKWLENLTRMRSKFEYLHQKMDRILETIIDDHKANSRTKEGQVEGGEEDLIDVLLKYENSSTDQDFHLTIRNIKAILFDIFIAGSETSATTINWTMAEMMKDP 309          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14
Identity = 58/225 (25.78%), Postives = 112/225 (49.78%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPV--TLAEYTPWLRWMFP--LEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHF---VDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            G+D+++  YG H+ K+R++ T            R   E E  ++V+ + R   NP+     + LR  L  + +NN+ R++  +RF S E  L    ++ K + G   +L         ++ P LR      L+  K VK  ERR KL K    +  +  +     +       +D +L+ Q++ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +Q+
Sbjct:  114 GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVRR---NPDAAAGGIVLRRRLQLMMYNNMYRIMFDRRFESEEDPLF---VKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKICKEVK--ERRLKLFKDYFVDERMKLESTKSTSNEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQK 330          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14
Identity = 52/231 (22.51%), Postives = 110/231 (47.62%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEE----YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNP 678
            RS+   ++    +D+  A YG ++ +++ V            + R +R++E++ M+E I       +     + L + L +++ + I+R+ LG+++            +FK+++    KL     +  Y PWL W+  +   + +  K     D+  + ++ +H     + G A +  FVD LL +Q E    +E+   +I  ++ ++++ G DT+   +EWAM EL+  P
Sbjct:  101 RSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKI------QKSSSLQVNLSELLGSLTNDVISRVALGRKYSDET--------DFKELMKRLTKLLGEFCVGTYVPWLAWIDWISGLDGQLKKTGNDLDEFLEKVVQDH-----EDGDAQRTDFVDVLLRIQREKSVGFEIDRLSIKAIILDVVVGGTDTSYALMEWAMTELLHRP 312          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 61/228 (26.75%), Postives = 112/228 (49.12%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKL--GAPVTLAEYTPWLRWMFP--LEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPH------FVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            G+D+++  YG H+ K+R++ T            R   E+E   +VE + +   NPE     + LR  L  + +NN+ R++  +RF S +  L    ++ K + G   +L  G      ++ P LR      L   K VK  ERR +L K    +    R+K G             +D +L  Q++ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +Q+
Sbjct:  114 GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAARVVEDVKK---NPESATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLF---VKLKALNGERSRLAQGFEYNYGDFIPILRPFLRGYLRICKEVK--ERRLQLFKDYFVDE---RKKFGSTKSMDNNSLKCAIDHILEAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQK 330          
The following BLAST results are available for this feature:
BLAST of FC924949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
C71BA_ARATH1.110e-1525.62Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH2.474e-1524.02Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME4.220e-1526.96Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C75A4_GENTR5.511e-1525.45Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C81E1_GLYEC7.198e-1525.70Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C81D1_ARATH1.603e-1426.82Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C71DB_LOTJA1.603e-1425.23Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
TCMO_GLYEC2.735e-1425.78Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C71AM_ARATH2.735e-1422.51Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
TCMO_CATRO4.665e-1426.75Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YO07FM1 TF Citrus clementina cDNA clone KN0AAP6YO07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924949 ID=FC924949; Name=FC924949; organism=Citrus clementina; type=EST; length=691bp
CGCAGAAGTAGACCTGCTCTTAGGCTTTCTAGAAATGGAAAAGACCTTAT
TTGGGCTGACTATGGTCCTCATTATGTTAAGGTTAGAAAAGTTTCTACTC
TTGAGCTTCTGTCTTCCAAAAAGCTTGAGGCCCTTAGGCCAATTAGGGAA
GATGAAGTCACTGCCATGGTTGAATCCATCTTTAGAGACTGCACTAACCC
AGAGAAAAAGGGGCAGAATATGAAACTGAGGGATTACTTGTCAGCAGTAT
CATTCAACAACATTACAAGACTTGTTCTTGGAAAGCGATTTATGAGCCCA
GAAGGTGTACTGAACGAGCAAGGTATTGAGTTCAAGGACATTCTTGGAAA
TGGAGTCAAGCTCGGGGCTCCTGTAACATTAGCAGAATACACTCCATGGC
TAAGATGGATGTTTCCACTAGAGGAAGAGAAATATGTGAAGCACAATGAA
CGCAGAGATAAGCTTACGAAAACCATAATGGCAGAACATACCCTTGCTCG
TCAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCTCA
ATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCTACTT
TGGAACATGATAATAGCAGGCATGGACACCACAACAATAACTGTAGAATG
GGCCATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAA
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