FC924949

Overview
NameFC924949
Unique NameFC924949
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14
Identity = 60/237 (25.32%), Postives = 111/237 (46.84%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAA--KPHFVDALLNLQEEYE----LSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            +S+ A RL    KD+ ++ +G ++ ++R ++           + R  RE+E + M+E + +  +N      +  LRD    +++N I R+ LGK++       N++ I+ K  L   V+L     + +Y P L W+  +   + K  K  +  D   + ++  H +  +K    A      VD LL +Q   E    +  D++  LL +   AG DT    +EW M EL+++PR  +
Sbjct:   94 KSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKL-KQMSNSSSSATD--LRDLFCWLAYNIINRVALGKKY-------NDE-IDAKATLDKFVELLGTFNVGDYIPCLEWVNKITGFDSKVDKVAKDLDTFLEFVIEAHMIRNEKEENRAGESKDLVDVLLEIQNGKETGFPIQRDSLKALLLDPFSAGTDTIYTVLEWTMTELLRHPRAME 319          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 60/237 (25.32%), Postives = 110/237 (46.41%), Query Frame = 1
Query:    7 SRP----ALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWM-FPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQ------EEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRV 684
            SRP    A  ++ N +DL++A YG  +  +RK+S+            + +R++EV  +   + R  T P   GQ + +         N + R ++G+R    +   + +  EF+ ++   + L     + ++ P L W+       K  + ++R D    +I+ EH +    G        +  L++L+      +   L+D  I  LL NM  AG DT+  TV+WA+AELI++P +
Sbjct:   99 SRPPNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGTLTRELVRVGTKPVNLGQLVNM------CVVNALGREMIGRRLFGADA--DHKADEFRSMVTEMMALAGVFNIGDFVPSLDWLDLQGVAGKMKRLHKRFDAFLSSILKEHEM---NGQDQKHTDMLSTLISLKGTDLDGDGGSLTDTEIKALLLNMFTAGTDTSASTVDWAIAELIRHPDI 324          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 62/239 (25.94%), Postives = 114/239 (47.70%), Query Frame = 1
Query:    7 SRPAL----RLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEG-VLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEY------ELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            +RP+L     LS N  D+ ++ Y  ++ +VRK+            +++PI+++EV  M++SI    +       N K  +   +V    + R   G  F   EG VLN     F  I+   +++    + A++ P++ W+  +      +  ER  +       +     ++G       FVD LL L++E       +L+ + I  +L ++++AG+DT+ IT+ WAM EL +NPRV +
Sbjct:   96 TRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKNPVNLNNKCLELTVSV----VCRTAFGVSF---EGTVLNSD--RFNKIVREALEMLGSFSAADFIPYVGWIIDVLTGLQGRR-ERSKRDLNAFFEQMFDLHKEGKKEGNEDFVDLLLRLEKEEAVLGNDKLTRNHIKAILLDVLLAGIDTSAITMTWAMTELARNPRVMK 324          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 59/224 (26.34%), Postives = 109/224 (48.66%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPV--TLAEYTPWLRWMFPLEEEKYVKH-NERRDKLTKTIMAEHTLARQKGGGAAKPHF---VDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            G+D+++  Y  H+ K+R++ T            R   EDE   +VE + +D   P+     + LR  L  + +NN+ R++  +RF S +  L  +    K + G   +L         ++ P LR  F     K VK   ERR KL K    E            + +F   +D +L+ Q++ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +Q+
Sbjct:  114 GQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKD---PQAATTGIVLRRRLQLLMYNNMYRIMFDRRFESVDDPLFNK---LKALNGERSRLAQSFEYNYGDFIPILR-PFLRGYLKLVKEVKERRLKLFKDYFVEERKKLTSTKSMTEENFKCAIDHVLDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPDIQK 330          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 60/221 (27.15%), Postives = 105/221 (47.51%), Query Frame = 1
Query:   55 ADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRD---YLSAVSFNNITRLVLGKRFMSPEGVLNEQGIE----FKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERR-DKLTKTIMAEHTLARQKGGGAAKPH-FVDALLNLQEEYELSD---DTII-GLLWNMIIAGMDTTTITVEWAMAELIKNP 678
            A YGP++ ++RK+ T              IR  EV   ++ +F   +N  K      L D   +L+ ++FN + R+V+GKR+    GV++ +G +    F   +   + L    T+A+  P LRW+     EK +K N +  DKL    + EH   +  G        F+D +++     ++     DTI       +I+ G D+T +T+ WA++ L++NP
Sbjct:  126 APYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEVRTSIKELFDIWSNGNKNESRYTLVDIKQWLAYLTFNMVVRMVVGKRYF---GVMHVEGKDKAQRFMKNIREFMNLMGTFTVADGVPCLRWLDLGGHEKAMKANAKEVDKLLSEWLEEHRQKKLLGENVESDRDFMDVMISALNGAQIGAFDADTICKATSLELILGGTDSTAVTLTWALSLLLRNP 343          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 66/236 (27.97%), Postives = 113/236 (47.88%), Query Frame = 1
Query:   10 RPALRLSR----NGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPL--EEEKYVKHNERRDKLTKTIMAEH-TLARQKGGGAAKPHFVDALLNLQEEYE--LSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            RP   LSR    NG  ++++ +G ++ ++RK+ T          + R IRE+EV  +V+ I    T  E+ G    L   + +++F    R   GK+    +  ++    +   +LG         ++A+  P  R +F +     K  K +   D++ + I+ EH    R      A    VD LL  Q+E E  L+DD I  ++ ++ I G +T++  VEW M+ELI+NPRV +
Sbjct:  112 RPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIA--ATASEEGGSIFNLTQSIYSMTFGIAARAAFGKKSRYQQVFISNMHKQLM-LLGG-------FSVADLYPSSR-VFQMMGATGKLEKVHRVTDRVLQDIIDEHKNRNRSSEEREAVEDLVDVLLKFQKESEFRLTDDNIKAVIQDIFIGGGETSSSVVEWGMSELIRNPRVME 336          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 61/238 (25.63%), Postives = 114/238 (47.90%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNE---RRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNL------QEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            ++  + + SR+GKD+ +A YG    ++RK+S           + R IRE+E   MV+ +        KK   + L   L  +  + I R   G+R    + V N++ IE  +++    K+G+  +   +   + W       ++   ++     D L   ++  H    +      +P  +D++L         E ++L+ D + G++ N+ +AG+DT+ IT+ WAMAEL+KNPRV +
Sbjct:   98 KTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKLKESA----KKKNTVDLSQTLFYLVGSIIFRATFGQRLDQNKHV-NKEKIE--ELMFEVQKVGSLSSSDIFPAGVGWFMDFVSGRHKTLHKVFVEVDTLLNHVIDGHLKNPEDKTNQDRPDIIDSILETIYKQEQDESFKLTIDHLKGIIQNIYLAGVDTSAITMIWAMAELVKNPRVMK 328          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 49/231 (21.21%), Postives = 113/231 (48.92%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEE----YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNP 678
            RS+   +L  +G+D+ +A YG ++ +++ V            + R +R++E++ M+E I       +     + + + L +++ + I+R+ LG+++            + K+++   + L    ++  Y PWL W+  +   + +  K     D+  + ++ +H       G   +  FVD LL +Q E    +E+    I  ++ ++++AG D++   ++WAM EL+++P
Sbjct:  101 RSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKI------QKSSSLQVNVSELLGSLTNDVISRIALGRKYSGE--------TDSKELMKRLMMLMGEFSVGTYVPWLGWIDWISGLDGQLNKTGNDLDEFLEKVVQDHV-----DGDGQRTDFVDVLLRIQREKSIGFEIDRLCIKAIVLDVLVAGTDSSYALMDWAMTELLRHP 312          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 54/232 (23.28%), Postives = 112/232 (48.28%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEE----YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPR 681
            RS+   +L  +  D+  A YG ++ +++ V            + R +RE+E++ M+E I +  + P      + L   L +++ + I ++ LG+++            +FK+++    KL    ++  Y PWL W+  +   + +  K     DK  + ++ +H       G      FVD LL +Q +    +E++  +I  ++ N+ + G DT++  +EWAM EL+++P+
Sbjct:  100 RSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLP------VNLSKILVSLTNDVICKVALGRKYGGET--------DFKELMERLNKLLGTFSVGSYVPWLAWIDWIRGLDCQLEKTANDVDKFFERVVQDHV-----DGNRDMTDFVDVLLAIQRDKTVGFEINRVSIKAIVMNVFVGGTDTSSTLMEWAMTELLRHPK 312          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 53/228 (23.25%), Postives = 107/228 (46.93%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEE----YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELI 669
            RS+   ++  NG+D+  A YG ++ +++ V            + R +R++E++ M+E I             + L + L  ++ N I R+ LG+++            +FKD++    +L    ++  Y  WL W+  +   + + +K +   D+  + ++ +H       G   K  FVD LL ++ E    +E+   +I  ++ ++ +  MDTT   +EWAM EL+
Sbjct:  102 RSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKI------RISSSLRINLSEILVNLTNNVICRVALGRKYGGK--------TDFKDLMKRLTRLLGEFSVGSYVSWLAWIDWIRGLDGQLIKISNDLDEFLERVVQDHV-----DGDGHKNDFVDFLLTIEREKSVGFEIDRLSIKAIILDVFVGDMDTTYTLLEWAMTELL 310          
The following BLAST results are available for this feature:
BLAST of FC924949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
C71A3_SOLME6.093e-1425.32Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
F3PH_ARATH7.958e-1425.32Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71BW_ARATH7.958e-1425.94Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
TCMO_RUTGR1.357e-1326.34Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
C82A3_SOYBN1.357e-1327.15Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C71DA_SOYBN1.773e-1327.97Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71B3_ARATH1.773e-1325.63Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71AL_ARATH2.315e-1321.21Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH3.024e-1323.28Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH3.024e-1323.25Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YO07FM1 TF Citrus clementina cDNA clone KN0AAP6YO07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924949 ID=FC924949; Name=FC924949; organism=Citrus clementina; type=EST; length=691bp
CGCAGAAGTAGACCTGCTCTTAGGCTTTCTAGAAATGGAAAAGACCTTAT
TTGGGCTGACTATGGTCCTCATTATGTTAAGGTTAGAAAAGTTTCTACTC
TTGAGCTTCTGTCTTCCAAAAAGCTTGAGGCCCTTAGGCCAATTAGGGAA
GATGAAGTCACTGCCATGGTTGAATCCATCTTTAGAGACTGCACTAACCC
AGAGAAAAAGGGGCAGAATATGAAACTGAGGGATTACTTGTCAGCAGTAT
CATTCAACAACATTACAAGACTTGTTCTTGGAAAGCGATTTATGAGCCCA
GAAGGTGTACTGAACGAGCAAGGTATTGAGTTCAAGGACATTCTTGGAAA
TGGAGTCAAGCTCGGGGCTCCTGTAACATTAGCAGAATACACTCCATGGC
TAAGATGGATGTTTCCACTAGAGGAAGAGAAATATGTGAAGCACAATGAA
CGCAGAGATAAGCTTACGAAAACCATAATGGCAGAACATACCCTTGCTCG
TCAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCTCA
ATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCTACTT
TGGAACATGATAATAGCAGGCATGGACACCACAACAATAACTGTAGAATG
GGCCATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAA
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