FC924949

Overview
NameFC924949
Unique NameFC924949
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 59/234 (25.21%), Postives = 111/234 (47.44%), Query Frame = 1
Query:    7 SRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGI--EFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTI--MAEHTLARQKGGGAAK--PHFVDALLNLQE----EYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNP 678
            ++ A ++S  G+DL++A YG ++  V+ + T          +    RE+E+T ++E++            ++ L   ++ +  + + ++VLGK++   EG ++ + I   F D +G      +PV   EY P L W+      K    + + +K+TK      E  L   +   A K  P FVD LL +Q     + +L    +  +++ M +    TT+  +EWAM  L++NP
Sbjct:  102 TKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETL----EEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSGEEGTIDVKTITKSFLDAVGL-----SPV--GEYIPSLAWI-----GKITGSDGKLEKITKQFGDFIEKVLQEHEDTTADKETPDFVDMLLTIQRDETAQCQLDKSDLKVIIFEMFLGSTTTTSAVIEWAMTRLMRNP 319          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 64/239 (26.78%), Postives = 116/239 (48.54%), Query Frame = 1
Query:    7 SRP----ALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEG-VLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEY------ELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            SRP    A  LS N  D+ ++ Y  ++ +VRK++           +++PI+++EV  +++SI             + L   L A++ + + R      F   EG VLN +   F +I+   +++    + +++ P++  +  L      +       L         L +QK    ++  FVD LL L++E       +L+ + I  +L ++++AGMDT+ IT+ WAMAEL KNPRV +
Sbjct:   97 SRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTP----INLNKTLLALTVSVVCRTAFSVNF---EGTVLNSE--RFNNIVREALEMLGSFSASDFIPYVGRIIDLLTGLQGRRERSMRDLDAFYEQMFDLHKQKKEEGSED-FVDLLLRLEKEEAVLGNDKLTRNHIKAILMDVLLAGMDTSAITMTWAMAELAKNPRVMK 325          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13
Identity = 59/229 (25.76%), Postives = 111/229 (48.47%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPV--TLAEYTPWLRWMFP--LEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPH-------FVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            G+D+++  YG H+ K+R++ T            R   E E  A+VE + +   NP+       +R  L  + +NN+ R++  +RF S E  + ++    + + G   +L         ++ P LR      L+  K VK  E R KL K    +    R+K G     +        +D +L+ Q + E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +QQ
Sbjct:  114 GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKK---NPDAAVSGTVIRRRLQLMMYNNMYRIMFDRRFESEEDPIFQR---LRALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKICKEVK--ETRLKLFKDYFVDE---RKKLGSTKSTNNNNELKCAIDHILDAQRKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQ 331          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13
Identity = 59/229 (25.76%), Postives = 115/229 (50.22%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPV--TLAEYTPWLRWMFP--LEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPH-------FVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            G+D+++  YG H+ K+R++ T            R   E E  A+V+ + +   NP+     + +R  L  + +NN+ R++  +RF S E  L ++    K + G   +L         ++ P LR      L+  K VK  E R KL K    ++ +  +K  G+ K          +D +L+ +++ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +QQ
Sbjct:  114 GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWEAEAAAVVDDVRK---NPDAAVSGLVIRRRLQLMMYNNMYRIMFDRRFESEEDPLFQR---LKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKICKEVK--ETRLKLFK----DYFVDERKNIGSTKSTNNEGLKCAIDHILDAEKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQ 330          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13
Identity = 48/219 (21.92%), Postives = 106/219 (48.40%), Query Frame = 1
Query:   40 KDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            K + +  YG ++ ++RK+            + +PIRE+ +T+ ++ +         +G  + +   + +  F    R  LG +    + +++        ++    K+     L +  P ++++  +   + K  K +++ D++ + I+ EH  A+    G      V   + L++E+ LSD++I  ++W++   G DT++ T+ WAMAE+IKNPR  +
Sbjct:  118 KGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRM------ATIEGSQVNVTKEVISTVFTITARTALGSKSRHHQKLIS--------VVTEAAKISGGFDLGDLYPSVKFLQHMSGLKPKLEKLHQQADQIMQNIINEHREAKSSATGDQGEEEVLLDVLLKKEFGLSDESIKAVIWDIFGGGSDTSSATITWAMAEMIKNPRTME 322          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13
Identity = 68/232 (29.31%), Postives = 112/232 (48.28%), Query Frame = 1
Query:   22 RLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPL---EEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNL---QEE---YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            +L R+G+D+  A YG    ++RK+S           + R IRE+E   MV+ +         K  ++ L   L  +  + I R   G+RF     V N + IE  D++    KLGA      +   L W         +K  K     D L   I+ +H     +     +P  +D+LL++   QE+   ++L+ D + G++ ++ +AG+DT+ IT+ WAMAEL+KNPRV +
Sbjct:  101 KLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKL----KEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRFDEGNHV-NAEKIE--DLMFEVQKLGALSNSDLFPGGLGWFVDFVSGHNKKLHKVFVEVDTLLNHIIDDHLKNSIEEITHDRPDIIDSLLDMIRKQEQGDSFKLTIDNLKGIIQDIYLAGVDTSAITMIWAMAELVKNPRVMK 325          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13
Identity = 58/234 (24.79%), Postives = 114/234 (48.72%), Query Frame = 1
Query:   22 RLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTP-----WLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSD------DTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            +LS   KD+ +A YG ++ +VRK++           + R IRE+EV  +V+ +         K   + L     +++ + I R+ LG+ F     V+++  IE  +++    +     T +++ P     ++ W+F    +K  K  +  D   + ++ +H     K  G      V  +L++ ++ E SD      D +  ++ ++ +AG+DT+ +T+ WAM ELI+NPRV +
Sbjct:  106 KLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSESAL----KQSPVDLSKTFFSLTASIICRVALGQNFNESGFVIDQDRIE--ELVTESAEALGTFTFSDFFPGGLGRFVDWLFQ-RHKKINKVFKELDAFYQHVIDDHL----KPEGRKNQDIVTLILDMIDKQEDSDSFKLNMDNLKAIVMDVFLAGIDTSAVTMIWAMTELIRNPRVMK 328          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13
Identity = 56/223 (25.11%), Postives = 108/223 (48.43%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPV--TLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHT--LARQKG-GGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            G+D+++  YG H+ K+R++ T            R   E+E   +VE + +   NPE     + LR  L  + +NN+ R++  +RF S +  L  +    K + G   +L         ++ P LR       +   +  ERR +L K    +    LA  K          +D +L+ Q++ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +Q+
Sbjct:  114 GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKK---NPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFNK---LKALNGERSRLAQSFDYNYGDFIPILRPFLRGYLKICQEVKERRLQLFKDYFVDERKKLASTKNMSNEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQK 330          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13
Identity = 53/225 (23.56%), Postives = 111/225 (49.33%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPV--TLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPH------FVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQ 687
            G+D+++  YG H+ K+R++ T            R   E E  A+V+ + +   NP+   + + +R  L  + +NN+ R++  +RF S +  L    ++ K + G   +L         ++ P LR       +   +  E+R +L K    +    R+K G             +D +L+ +++ E+++D ++ ++ N+ +A ++TT  ++EWA+AEL+ +P +Q
Sbjct:  114 GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVDDVKK---NPKAATEGVVIRKRLQLMMYNNMFRIMFDRRFESEDDPLF---VKLKMLNGERSRLAQSFEYNYGDFIPILRPFLKGYLKLCKEVKEKRFQLFKDYFVDE---RKKLGSTKSMDNNQLKCAIDHILDAKDKGEINEDNVLYIVENINVAAIETTLWSIEWAIAELVNHPEIQ 329          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 52/223 (23.32%), Postives = 105/223 (47.09%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVT--LAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHF---VDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            G+D+++  Y  H+ K+R++ T            R   EDE   +VE +     NPE     + LR+ L  + +NN+ R++  +RF S +  L    ++ K + G   +L         ++ P LR       +   +  ++R KL K    +     +             +D ++  Q++ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ NP +Q+
Sbjct:  115 GQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQYRFGWEDEAARVVEDVK---ANPEAATNGIVLRNRLQLLMYNNMYRIMFDRRFESVDDPLF---LKLKALNGERSRLAQSFEYHFGDFIPILRPFLRGYLKLCQEIKDKRLKLFKDYFVDERKKLESIKSVDNNSLKCAIDHIIEAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNNPEIQK 331          
The following BLAST results are available for this feature:
BLAST of FC924949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
C71AG_ARATH3.024e-1325.21Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH3.950e-1326.78Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN5.158e-1325.76Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU5.158e-1325.76Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C71D9_SOYBN5.158e-1321.92Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71BO_ARATH5.158e-1329.31Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH5.158e-1324.79Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_POPKI6.737e-1325.11Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_ZINEL8.799e-1323.56Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_PETCR1.960e-1223.32Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YO07FM1 TF Citrus clementina cDNA clone KN0AAP6YO07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924949 ID=FC924949; Name=FC924949; organism=Citrus clementina; type=EST; length=691bp
CGCAGAAGTAGACCTGCTCTTAGGCTTTCTAGAAATGGAAAAGACCTTAT
TTGGGCTGACTATGGTCCTCATTATGTTAAGGTTAGAAAAGTTTCTACTC
TTGAGCTTCTGTCTTCCAAAAAGCTTGAGGCCCTTAGGCCAATTAGGGAA
GATGAAGTCACTGCCATGGTTGAATCCATCTTTAGAGACTGCACTAACCC
AGAGAAAAAGGGGCAGAATATGAAACTGAGGGATTACTTGTCAGCAGTAT
CATTCAACAACATTACAAGACTTGTTCTTGGAAAGCGATTTATGAGCCCA
GAAGGTGTACTGAACGAGCAAGGTATTGAGTTCAAGGACATTCTTGGAAA
TGGAGTCAAGCTCGGGGCTCCTGTAACATTAGCAGAATACACTCCATGGC
TAAGATGGATGTTTCCACTAGAGGAAGAGAAATATGTGAAGCACAATGAA
CGCAGAGATAAGCTTACGAAAACCATAATGGCAGAACATACCCTTGCTCG
TCAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCTCA
ATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCTACTT
TGGAACATGATAATAGCAGGCATGGACACCACAACAATAACTGTAGAATG
GGCCATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAA
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