FC924949

Overview
NameFC924949
Unique NameFC924949
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 54/225 (24.00%), Postives = 106/225 (47.11%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPV--TLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPH------FVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQ 687
            G+D+++  YG H+ K+R++ T            R   E E  A+V+ + +   NP    + + +R  L  + +NN+ R++  +RF S +  L    ++ K + G   +L         ++ P LR   P          E +DK  +         R+K G   K         +D +L  +E+ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +Q
Sbjct:  114 GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEAEAAAVVDDVKK---NPAAATEGIVIRRRLQLMMYNNMFRIMFDRRFESEDDPLF---LKLKALNGERSRLAQSFEYNYGDFIPILR---PFLRNYLKLCKEVKDKRIQLFKDYFVDERKKIGSTKKMDNNQLKCAIDHILEAKEKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQ 329          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 58/228 (25.44%), Postives = 101/228 (44.30%), Query Frame = 1
Query:   25 LSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCT---NPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWM-FPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELS----DDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRV 684
            L  N   ++ A YGP++ ++RK+             L  +R  EV + +  +FRD     N +     ++L+ + S + FN I R+V GKR+ S     +E+       +   V+L A  T+ +  P+LRW  F   E    +  +  D++    + EH   R+ G        +  LL+L E   +     D  I   +  +I AG + +  T+ WA + ++ NP V
Sbjct:  115 LCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATVELKQWFSLLVFNMILRMVCGKRYFSASTSDDEKANRCVKAVDEFVRLAATFTVGDAIPYLRWFDFGGYENDMRETGKELDEIIGEWLDEHRQKRKMGENV--QDLMSVLLSLLEGKTIEGMNVDIVIKSFVLTVIQAGTEASITTLIWATSLILNNPSV 340          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12
Identity = 56/223 (25.11%), Postives = 107/223 (47.98%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPV--TLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHT--LARQKGG-GAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            G+D+++  YG H+ K+R++ T            R   E+E   +VE + +   NP      + LR  L  + +NN+ R++  +RF S E  L  +    K + G   +L         ++ P LR       +   +  ERR +L K    +    LA  K          +D +L+ Q++ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +Q+
Sbjct:  114 GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKK---NPGAATHGIVLRRRLQLMMYNNMYRIMFDRRFESEEDPLFNK---LKALNGERSRLAQSFDYNYGDFIPILRPFLRGYLKICQEVKERRLQLFKDYFVDERKKLASTKNMCNEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQK 330          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12
Identity = 54/234 (23.08%), Postives = 108/234 (46.15%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGV--LNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEE----YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPR 681
            RS+    L   G+D+++A YG ++ +++ V            +   +REDEV AM+E + +  ++   +     L +    +  +  +R+ LG++    E    L ++  +  ++LG          + EY P L W+  +     K  + +     L   ++ EH  A        K  FVD LL+++++    +++  + I  ++ +M I G  TT+  +EW M ELI++P+
Sbjct:  102 RSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSE----NLSELFITLPSDVTSRVALGRKHSEDETARDLKKRVRQIMELLGE-------FPIGEYVPILAWIDGIRGFNNKIKEVSRGFSDLMDKVVQEHLEASND-----KADFVDILLSIEKDKNSGFQVQRNDIKFMILDMFIGGTSTTSTLLEWTMTELIRSPK 319          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12
Identity = 51/222 (22.97%), Postives = 105/222 (47.30%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPV--TLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHT---LARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQ 687
            G+D+++  YG H+ K+R++ T            R   E E  ++VE + +   NP+   + + LR  L  + +NN+ R++  +RF S +  L    +  K + G   +L         ++ P LR       +      +RR  L K    +      + +  G       +D +L  +++ E+++D ++ ++ N+ +A ++TT  ++EW +AEL+ +P +Q
Sbjct:  114 GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNREGWEFEAASVVEDVKK---NPDSATKGIVLRKRLQLMMYNNMFRIMFDRRFESEDDPLF---LRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKDRRIALFKKYFVDERKQIASSKPTGSEGLKCAIDHILEAEQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQ 329          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12
Identity = 57/232 (24.57%), Postives = 110/232 (47.41%), Query Frame = 1
Query:   25 LSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFP-LEEEKYVKHN--ERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQ-------EEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            +S N KD+ +A YG  +  +RK+            + R IRE+E   +++ +    T    K   + L+  L  +  + + RL  G      E V +E  +   D++     L A V   ++ P + W+   +  +    +N     D   + ++ +H    ++   +  P  VD +L+L        E ++L+ D + G++ ++ +AG++T+ +T+ WAMAELI+NPRV +
Sbjct:  108 ISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKL----TESALKKSPVNLKKTLFTLVASIVCRLAFGVNIHKCEFV-DEDNVA--DLVNKFEMLVAGVAFTDFFPGVGWLVDRISGQNKTLNNVFSELDTFFQNVLDDHIKPGRQV--SENPDVVDVMLDLMKKQEKDGESFKLTTDHLKGIISDIFLAGVNTSAVTLNWAMAELIRNPRVMK 330          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12
Identity = 60/232 (25.86%), Postives = 108/232 (46.55%), Query Frame = 1
Query:   28 SRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPW--LRWMFPL---EEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEE------YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            SRNGKD+ +  YG  + ++RK+S           + + IRE+E   M++ +         K   + L   L  ++ + I R   G+ F   + V  E     K+++   +        +++ P   L+W       + ++      R D     I+ +H     K     +P  VDA+L++ +       ++L+ D + G+L N+  AG+DT+ IT+ WAMAEL++NPRV +
Sbjct:  109 SRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKL----KELASKQSPVDLSKILFGLTASIIFRTAFGQSFFDNKHVDQES---IKELMFESLS-NMTFRFSDFFPTAGLKWFIGFVSGQHKRLYNVFNRVDTFFNHIVDDH---HSKKATQDRPDMVDAILDMIDNEQQYASFKLTVDHLKGVLSNIYHAGIDTSAITLIWAMAELVRNPRVMK 329          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12
Identity = 54/234 (23.08%), Postives = 113/234 (48.29%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFR-DCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPE--GVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEE----YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNP 678
            +S+    L   G+D+++  YG ++ +++ V            +   +RE+EV AM+E + +  C++  +      L +    ++ +  +R+ LGK++   E  G L ++  +  ++L           + +Y P L W+  +     K V+ +     L + ++ EH  A     G  K  FV+ LL++++E    +++  + I  ++ +M I G+ T++  +EW M ELI+NP
Sbjct:  102 KSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAEN-----LSELFVTLTSDVTSRVSLGKKYWEDETAGGLKKRVRQIMELLRE-------FPIGDYVPALAWIDRINGFNSKIVEVSRAYSDLMEKVVQEHLEA-----GEHKADFVNILLSIEKEKNNGFKVQRNDIKFMILDMFIGGISTSSTLLEWIMTELIRNP 318          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.728e-12
Identity = 50/232 (21.55%), Postives = 108/232 (46.55%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEE----YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPR 681
            RS+ + +L  N +D+  A YG ++ +++ V            + R +RE+E+T M+  I +  + P        +   L  ++ + I R+ LG+++            +FK +     +L    ++  + PWL W+  +   + +  K  +  D   + ++ +H    ++ G       +DALL ++ E    +E+   +I  +  ++ + G DT+   +EWAM EL+++P+
Sbjct:   99 RSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLP------FNVSKVLECLTNDVICRVALGRKYGGE--------TDFKKLTDRLSELLGTFSIGSFVPWLAWVDWIRGWDAQLDKMGKDLDDFFEKVVQDHEDGDRRDG----TDLIDALLRVKREKSPGFEIERVSIKAITLDVFVGGSDTSFTLLEWAMTELLRHPK 312          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.271e-11
Identity = 53/216 (24.54%), Postives = 102/216 (47.22%), Query Frame = 1
Query:   52 WADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFM--SPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHN--ERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQ 687
            +A YG ++  +R++++          A   ++  ++ A +  I  +     K+ +++++R  L   S +N+   V G+ +    P   + + GI    ++  G  L      A++ P+L   F  +  ++   N     ++   TI+AEH  ++ +        FVD LL+L E  +LSD  +I +LW MI  G DT  + +EW +A +  +P VQ
Sbjct:  146 FASYGVYWRSLRRIASNHLFCPRQIKASE-LQRSQIAAQMVHILNN-----KRHRSLRVRQVLKKASLSNMMCSVFGQEYKLHDPNSGMEDLGI----LVDQGYDLLGLFNWADHLPFLAH-FDAQNIRFRCSNLVPMVNRFVGTIIAEHRASKTE----TNRDFVDVLLSLPEPDQLSDSDMIAVLWEMIFRGTDTVAVLIEWILARMALHPHVQ 346          
The following BLAST results are available for this feature:
BLAST of FC924949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
TCMO_HELTU1.960e-1224.00Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
C82A2_SOYBN1.960e-1225.44Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
TCMO_POPTM4.367e-1225.11Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
C71AD_ARATH4.367e-1223.08Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
TCMO_ARATH7.448e-1222.97Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C71B7_ARATH7.448e-1224.57Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71B4_ARATH7.448e-1225.86Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71AI_ARATH7.448e-1223.08Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH9.728e-1221.55Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C78A3_SOYBN1.271e-1124.54Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YO07FM1 TF Citrus clementina cDNA clone KN0AAP6YO07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924949 ID=FC924949; Name=FC924949; organism=Citrus clementina; type=EST; length=691bp
CGCAGAAGTAGACCTGCTCTTAGGCTTTCTAGAAATGGAAAAGACCTTAT
TTGGGCTGACTATGGTCCTCATTATGTTAAGGTTAGAAAAGTTTCTACTC
TTGAGCTTCTGTCTTCCAAAAAGCTTGAGGCCCTTAGGCCAATTAGGGAA
GATGAAGTCACTGCCATGGTTGAATCCATCTTTAGAGACTGCACTAACCC
AGAGAAAAAGGGGCAGAATATGAAACTGAGGGATTACTTGTCAGCAGTAT
CATTCAACAACATTACAAGACTTGTTCTTGGAAAGCGATTTATGAGCCCA
GAAGGTGTACTGAACGAGCAAGGTATTGAGTTCAAGGACATTCTTGGAAA
TGGAGTCAAGCTCGGGGCTCCTGTAACATTAGCAGAATACACTCCATGGC
TAAGATGGATGTTTCCACTAGAGGAAGAGAAATATGTGAAGCACAATGAA
CGCAGAGATAAGCTTACGAAAACCATAATGGCAGAACATACCCTTGCTCG
TCAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCTCA
ATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCTACTT
TGGAACATGATAATAGCAGGCATGGACACCACAACAATAACTGTAGAATG
GGCCATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAA
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