FC924955
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 58/208 (27.88%), Postives = 105/208 (50.48%), Query Frame = 3 Query: 69 NVTGRRSRKLVVRTSSLKTPISAKQAE-KNAMQ-YRKLGDSDLVISEITLGT-MTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQ--PRDKVIIATKVSGYSERSSFLRDNAKVLR-VDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEG 674 + TG +R + +T S S + K +Q YR LG S L +S + LGT +TFG Q T++ + ++++ A++NGIN+ D++E Y GK ++ + + +K + R ++I TK+ F A+ R + +I E ++ SL+RL +Y+D++ + PD P+ P+ E +RA +I++G Sbjct: 5 STTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVY-------AAGKAEVVLGNIIKKKGWRRSSLVITTKI--------FWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPD-----------------PNTPMEETVRAMTHVINQG 180
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 60/214 (28.04%), Postives = 101/214 (47.20%), Query Frame = 3 Query: 48 HSIQPLSNVTGRRSRKLVV-RTSSLKTPISAKQAEKNAMQYRKLGDSDLVISEITLGT-MTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQ--PRDKVIIATKVSGYSERSSFLRDNAKVLR-VDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEG 674 H P G +SR VV R + + M+YR LG S L +S + LGT +TFG Q +++ + ++L+ A+E+G+N+ D++E Y GK + + + LKS+ R +I TK+ F A+ R + +I E ++ SL RL +Y+D++ + D PS P+ E +RA +I++G Sbjct: 40 HGNPPGGGGLGSKSRTAVVPRPPAPAGALRESTGRGTGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDLLTVAYEHGVNLFDTAEVY-------AAGKAERTLGNILKSKGWRRSSYVITTKI--------FWGGQAETERGLSRKHIIEGLQGSLDRLQLEYVDIVFANRSD-----------------PSSPMEEIVRAMTYVINQG 221
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 58/208 (27.88%), Postives = 104/208 (50.00%), Query Frame = 3 Query: 69 NVTGRRSRKLVVRTSSLKTPISAKQAE-KNAMQ-YRKLGDSDLVISEITLGT-MTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQ--PRDKVIIATKVSGYSERSSFLRDNAKVLR-VDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEG 674 + TG +R + +T S S + K +Q YR LG S L +S + LGT +TFG Q T++ + +++ A++NGIN+ D++E Y GK ++ + + +K + R ++I TK+ F A+ R + +I E ++ SL+RL +Y+D++ + PD P+ P+ E +RA +I++G Sbjct: 5 STTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVY-------AAGKAEVVLGNIIKKKGWRRSSLVITTKI--------FWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPD-----------------PNTPMEETVRAMTHVINQG 180
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 58/208 (27.88%), Postives = 104/208 (50.00%), Query Frame = 3 Query: 69 NVTGRRSRKLVVRTSSLKTPISAKQAE-KNAMQ-YRKLGDSDLVISEITLGT-MTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQ--PRDKVIIATKVSGYSERSSFLRDNAKVLR-VDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEG 674 + TG +R + +T S S + K +Q YR LG S L +S + LGT +TFG Q T++ + +++ A++NGIN+ D++E Y GK ++ + + +K + R ++I TK+ F A+ R + +I E ++ SL+RL +Y+D++ + PD P+ P+ E +RA +I++G Sbjct: 5 STTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVY-------AAGKAEVVLGNIIKKKGWRRSSLVITTKI--------FWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPD-----------------PNTPMEETVRAMTHVINQG 180
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: KCAB1_CHICK (Voltage-gated potassium channel subunit beta-1 OS=Gallus gallus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 57/207 (27.54%), Postives = 105/207 (50.72%), Query Frame = 3 Query: 84 RSRKLVVRTSSLKTP---ISAKQ--AEKNAMQYRKLGDSDLVISEITLGT-MTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQ--PRDKVIIATKV--SGYSERSSFLRDNAKVLRVDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEG 674 R+ ++ R+ TP IS K+ A++ M+YR LG S L +S + LGT +TFG Q +++ + ++++ A+E+G+N+ D++E Y GK ++ + + LK + R ++I TK+ G +E L +I E + SL+RL +Y+D++ + PD + P+ E +RA +I++G Sbjct: 41 RTVAIIARSLGTFTPQHHISLKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYESGVNLFDTAEVY-------AAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETERGL---------SRKHIIEGLRASLQRLQLEYVDVVFANRPDN-----------------NTPMEEIVRAMTHVINQG 214
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 57/207 (27.54%), Postives = 105/207 (50.72%), Query Frame = 3 Query: 84 RSRKLVVRTSSLKTP---ISAKQ--AEKNAMQYRKLGDSDLVISEITLGT-MTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQ--PRDKVIIATKV--SGYSERSSFLRDNAKVLRVDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEG 674 R+ ++ R+ TP IS K+ A++ M+YR LG S L +S + LGT +TFG Q +++ + +++ A+E+G+N+ D++E Y GK ++ + S +K + R ++I TK+ G +E L +I E ++ SL+RL +Y+D++ + PD + P+ E +RA +I++G Sbjct: 41 RTVAIIARSLGTFTPQHHISLKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVY-------AAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGL---------SRKHIIEGLKGSLQRLQLEYVDVVFANRPD-----------------SNTPMEEIVRAMTHVINQG 214
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 57/207 (27.54%), Postives = 105/207 (50.72%), Query Frame = 3 Query: 84 RSRKLVVRTSSLKTP---ISAKQ--AEKNAMQYRKLGDSDLVISEITLGT-MTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQ--PRDKVIIATKV--SGYSERSSFLRDNAKVLRVDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEG 674 R+ ++ R+ TP IS K+ A++ M+YR LG S L +S + LGT +TFG Q +++ + +++ A+E+G+N+ D++E Y GK ++ + S +K + R ++I TK+ G +E L +I E ++ SL+RL +Y+D++ + PD + P+ E +RA +I++G Sbjct: 41 RTVAIIARSLGTFTPQHHISLKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVY-------AAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGL---------SRKHIIEGLKGSLQRLQLEYVDVVFANRPD-----------------SNTPMEEIVRAMTHVINQG 214
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 57/207 (27.54%), Postives = 105/207 (50.72%), Query Frame = 3 Query: 84 RSRKLVVRTSSLKTP---ISAKQ--AEKNAMQYRKLGDSDLVISEITLGT-MTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQ--PRDKVIIATKV--SGYSERSSFLRDNAKVLRVDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEG 674 R+ ++ R+ TP IS K+ A++ M+YR LG S L +S + LGT +TFG Q +++ + +++ A+E+G+N+ D++E Y GK ++ + S +K + R ++I TK+ G +E L +I E ++ SL+RL +Y+D++ + PD + P+ E +RA +I++G Sbjct: 41 RTVAIIARSLGTFTPQHHISLKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVY-------AAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGL---------SRKHIIEGLKGSLQRLQLEYVDVVFANRPD-----------------SNTPMEEIVRAMTHVINQG 214 The following BLAST results are available for this feature:
BLAST of FC924955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924955 ID=FC924955; Name=FC924955; organism=Citrus clementina; type=EST; length=680bpback to top |