FC924968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924968 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.231e-19 Identity = 55/136 (40.44%), Postives = 69/136 (50.74%), Query Frame = 1 Query: 49 AKMSLIPSIFGNRSVF---------DPFSSDVWAPLGSSSNEVS-TFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVL 426 AK SL+P I ++ DPF P G +E S T + A+VDWKETPE HV D+PGL + RVL++SGER E++ K D W RVE P+N +D VKA MENGVL Sbjct: 26 AKASLLPFIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVL 161
BLAST of FC924968 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.983e-18 Identity = 49/111 (44.14%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 97 DPFSSDVWAPLGSSSNEVSTFAS-AQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVL 426 DPF P G +E S S A+VDWKETPE HV D+PGL + RVL++SGER E+E K D W RVE P+N +D VKA +ENGVL Sbjct: 43 DPFRVLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVL 153
BLAST of FC924968 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.983e-18 Identity = 60/133 (45.11%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 55 MSLIPSIFGNRSVFDPFSSDVWA---PLG---SSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEK--EDKND-KWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVL 426 MSL+ S GN V DP S D WA P G S + + +VDWKETP AHVF ADLPG+ DG VL ISGER+ E+ + KND +W VE P A++DQV ASM+NGVL Sbjct: 1 MSLVRS--GN--VLDPMSVDFWADADPFGAVRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVL 129
BLAST of FC924968 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.779e-15 Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 1 Query: 97 DPFSSDVWAPLGSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVL 426 DPF PLG + + A+VDWKET E H D+PGL + VL++SGER E+E K D+W RVE P+N ++ VKA +ENGVL Sbjct: 48 DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVL 157
BLAST of FC924968 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.846e-14 Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 49 AKMSLIPSIFGNRSVFDPFSSDVWAPLGSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGER----SVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVL 426 A+ +P + G + DPF P G ++V+ + A+VDW+ET +AH D+PG+ D RVL+ISGER + E++ D W R E P+NA +D + AS++NGVL Sbjct: 38 ARDEAVPEL-GLLAAADPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVL 166
BLAST of FC924968 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13 Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 160 ASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVL 426 ++A +DWKET AHVF AD+PG+ + +VL+ISG+R+ E+K ++W RVE P NA D V A+++NGVL Sbjct: 68 STASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVL 156
BLAST of FC924968 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.291e-12 Identity = 38/74 (51.35%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 268 VLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 489 +LQISGER+VEKEDKND W RVE P+NAK+DQVKASMENGVL +I+I+G Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of FC924968 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 41/123 (33.33%), Postives = 67/123 (54.47%), Query Frame = 1 Query: 91 VFDPFSSDVWAPL---GSS-------SNEVSTFASAQVDWKETPEAHVFKADLP-GLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVL 426 +FD + D W P G++ +++ S FA+ ++ +ET EA+VF+ADLP G+ +G VL I+GERSV +E+K + +E P++A +D V+ASM+ G+L Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGML 128 The following BLAST results are available for this feature:
BLAST of FC924968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC924968 ID=FC924968; Name=FC924968; organism=Citrus clementina; type=EST; length=739bpback to top |