FC924972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTA (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 8.116e-66 Identity = 125/187 (66.84%), Postives = 149/187 (79.68%), Query Frame = 1 Query: 97 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ A+GA+IPKGVLL GPPGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF++AK+N+PCI+FVDEIDAV +DEREQTLNQLL EMDGF G+I+IAATNR DILD ALLRPGRFDRQ+ V P Sbjct: 147 KSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNP 333
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 8.116e-66 Identity = 125/187 (66.84%), Postives = 149/187 (79.68%), Query Frame = 1 Query: 97 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ A+GA+IPKGVLL GPPGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF++AK+N+PCI+FVDEIDAV +DEREQTLNQLL EMDGF G+I+IAATNR DILD ALLRPGRFDRQ+ V P Sbjct: 147 KSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNP 333
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 6.871e-65 Identity = 121/172 (70.35%), Postives = 145/172 (84.30%), Query Frame = 1 Query: 142 FDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 F DVAGVDEAK++ MEVV+FLK P+++T IG +IP+GVLLVGPPGTGKTLLA+A+AGEA VPFF ISGS+F+EMFVG+GASRVRDLFK+A+E AP I+F+DE+DA+ NDEREQTLNQLL EMDGF+ TG+I++AATNR D+LD ALLRPGRFDRQV VD P Sbjct: 140 FADVAGVDEAKEELMEVVDFLKFPKKYTEIGGKIPRGVLLVGPPGTGKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAI-GKSRLNAIHSNDEREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRP 310
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.172e-64 Identity = 124/187 (66.31%), Postives = 147/187 (78.61%), Query Frame = 1 Query: 97 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ +GA+IPKGVLL GPPGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF +AK+N+PCI+FVDEIDAV +DEREQTLNQLL EMDGF G+I+IAATNR DILD ALLRPGRFDRQ+ V P Sbjct: 147 KSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPCRYQTLGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNP 333
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.296e-63 Identity = 125/188 (66.49%), Postives = 149/188 (79.26%), Query Frame = 1 Query: 97 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN-TGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +S+AK Q + V F DVAG +E KQ+ +EVV+FLK P+++ +GARIP GVLL GPPGTGKTLLAKA+AGEAGVPF+SISGS+FVEMFVGVGASRVRDLF+ AK+ AP I+F+DEIDAV NDEREQTLNQLL EMDGF+ + +IVIAATNR+D+LD ALLRPGRFDR+V V P Sbjct: 177 KSRAKQQDGKTSKVRFADVAGSEEEKQELVEVVDFLKNPKKYHDLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAP 364
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.192e-62 Identity = 121/188 (64.36%), Postives = 146/188 (77.66%), Query Frame = 1 Query: 97 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +S+AK +E VTF DVAG++E K++ E++E+LK P +F +G R PKGVLL G PG GKTLLAKAIAGEA VPF S+SGS+FVEMFVGVGA+RVRDLF+ AK++APCI+F+DEIDAV +DEREQTLNQLL EMDGF+ + GIIVIAATNR DILD ALLRPGRFDRQ+ + P Sbjct: 139 KSRAKVYIEEKPKVTFKDVAGIEEVKEEVKEIIEYLKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKP 326
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 7.110e-62 Identity = 115/174 (66.09%), Postives = 137/174 (78.74%), Query Frame = 1 Query: 136 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 + F DVAG DEAKQ+ ME V FLK P+++ +GA+IPKG LLVGPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR LF++A++ AP I+F+DEIDA+ NDERE TLNQLL EMDGF G++V+A TNR DILD ALLRPGRFDRQ+T+D P Sbjct: 319 IYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKP 492
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 236.498 bits (602), Expect = 9.286e-62 Identity = 120/189 (63.49%), Postives = 143/189 (75.66%), Query Frame = 1 Query: 97 QSKAK-FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +SKAK F E + + F DVAG DEAK++ ME V FLK+P R+ +GA+IP+G +L GPPGTGKTLLAKA AGEAGVPF+ +SGSEFVEMFVGVGA+RVRDLFK A+ENAP IVF+DEIDA+ NDERE TLNQ+L EMDGF ++V+A TNR DILD ALLRPGRFDR + +D P Sbjct: 331 RSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKP 519
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.584e-61 Identity = 118/175 (67.43%), Postives = 141/175 (80.57%), Query Frame = 1 Query: 136 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +TF DVAGVDEAK++ E+VEFL+ PE++ +GAR P+GVLLVG PGTGKTLLAKA+AGEA VPF S S SEFVE++VG+GASRVRDLF +AK+ AP I+F+DEIDAV NDEREQTLNQLLTEMDGF+ N+ +IV+ ATNRAD+LD AL RPGRFDR VTV+ P Sbjct: 322 ITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETP 496
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: RCA1_SCHPO (Mitochondrial respiratory chain complexes assembly protein rca1 OS=Schizosaccharomyces pombe GN=SPBC543.09 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.069e-61 Identity = 119/189 (62.96%), Postives = 144/189 (76.19%), Query Frame = 1 Query: 97 QSKAK-FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +S+AK F E + + F DVAGVDEAK++ ME V+FLK P+ + +GA+IP+G +L GPPGTGKTLLAKA AGEA VPF S+SGSEF+EMFVGVG SRVRDLF A++NAPCI+F+DEIDA+ NDERE TLNQLL EMDGF + I+V A TNR D+LD ALLRPGRFDRQ+T+D P Sbjct: 279 KSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRP 467 The following BLAST results are available for this feature:
BLAST of FC924972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924972 ID=FC924972; Name=FC924972; organism=Citrus clementina; type=EST; length=657bpback to top |