FC924972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.609e-61 Identity = 117/184 (63.59%), Postives = 140/184 (76.09%), Query Frame = 1 Query: 109 KFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 K V F DVAG DEAKQ+ ME V FLK P+++ +GA+IPKG LLVGPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A++ AP I+F+DEIDA+ NDERE TLNQLL EMDGF +G++V+A TNR DILD ALLRPGRFDRQ+T+D P Sbjct: 323 KMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKP 506
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 7.861e-61 Identity = 117/175 (66.86%), Postives = 141/175 (80.57%), Query Frame = 1 Query: 136 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +TF DVAGVDEAK++ E+VEFLK P+R+ +GAR P+GVLLVG PGTGKTLLAKA+AGE+ VPF S S SEFVE++VG+GASRVRDLF +AK+ AP I+F+DEIDAV NDEREQTLNQLLTEMDGF+ ++ +IV+ ATNRAD+LD AL RPGRFDR VTV+ P Sbjct: 326 ITFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESP 500
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2) HSP 1 Score: 232.261 bits (591), Expect = 1.751e-60 Identity = 120/181 (66.30%), Postives = 145/181 (80.11%), Query Frame = 1 Query: 121 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +PN V F+D+AG +EAK++ +E+V+FLK PER+ +GA+IPKGVLLVGPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+DEIDA+ NDEREQTLNQLL EMDGF N +IV+AATNR +ILD AL+RPGRFDRQV VD P Sbjct: 164 KPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKP 342
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.751e-60 Identity = 120/181 (66.30%), Postives = 145/181 (80.11%), Query Frame = 1 Query: 121 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +PN V F+D+AG +EAK++ +E+V+FLK PER+ +GA+IPKGVLLVGPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+DEIDA+ NDEREQTLNQLL EMDGF N +IV+AATNR +ILD AL+RPGRFDRQV VD P Sbjct: 164 KPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKP 342
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.287e-60 Identity = 118/176 (67.05%), Postives = 142/176 (80.68%), Query Frame = 1 Query: 136 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 V F+D+AG +EAK++ +E+V+FLK P+R+ ++GA+IPKGVLLVGPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF AK+ AP I+F+DEIDA+ NDEREQTLNQLL EMDGF N +IV+AATNR +ILD ALLRPGRFDRQV VD P Sbjct: 173 VRFNDMAGNEEAKEEVVEIVDFLKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAKAVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKP 348
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.987e-60 Identity = 117/175 (66.86%), Postives = 140/175 (80.00%), Query Frame = 1 Query: 136 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 VTF DVAGVDEAK++ E+VEFL+ PER+ +GAR P+GVLLVG PGTGKTLLAKA+AGEA VPF S S SEFVE++VG+GA+RVRDLF +AK+ +P I+F+DEIDAV NDEREQTLNQLLTEMDGF+ N+ +IV+ ATNRAD+LD AL RPGRFDR V V+ P Sbjct: 343 VTFADVAGVDEAKEELEEIVEFLRNPERYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGAARVRDLFARAKKESPSIIFIDEIDAVAKSRDGRYRIVSNDEREQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAP 517
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 8.692e-60 Identity = 115/184 (62.50%), Postives = 140/184 (76.09%), Query Frame = 1 Query: 109 KFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 K V F DVAG DEAKQ+ ME V FLK P+++ +GA+IPKG LLVGPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A++ +P IVF+DEIDA+ +DERE TLNQLL EMDGF +G++V+A TNR DILD ALLRPGRFDRQ+++D P Sbjct: 308 KLDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCSPSIVFIDEIDAIGRARGRGGFSGGHDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKP 491
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.529e-59 Identity = 115/190 (60.53%), Postives = 143/190 (75.26%), Query Frame = 1 Query: 97 QSKAK-FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV--XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +S+AK F E + ++F +VAG DEAKQ+ ME V FLK P ++T +GA+IP+G +L GPPGTGKTLLAKA AGEA VPF S+SGSEFVEMFVGVGASRVRDLF +A+ AP I+F+DEIDA+ NDERE TLNQLL EMDGF + ++V+A TNR D+LD+AL+RPGRFDR + +D P Sbjct: 271 KSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSP 460
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.634e-59 Identity = 112/175 (64.00%), Postives = 137/175 (78.29%), Query Frame = 1 Query: 136 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 + F DVAG +EAKQ+ ME V FL+ P+++ +GA+IPKG LLVGPPGTGKTLLAKA AGE+ VPF SISGS+F+EMFVGVG SRVR+LF++A++ AP I+F+DEIDA+ NDERE TLNQLL EMDGF G++V+A TNR DILD ALLRPGRFDRQ+T+D P Sbjct: 324 IYFKDVAGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKP 498
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: YMEL1_MOUSE (ATP-dependent metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.062e-57 Identity = 108/174 (62.07%), Postives = 137/174 (78.74%), Query Frame = 1 Query: 136 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGEA VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + QT+NQLL EMDGF+ N G+I+I ATN + LD+AL+RPGRFD QVTV P Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRP 449 The following BLAST results are available for this feature:
BLAST of FC924972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924972 ID=FC924972; Name=FC924972; organism=Citrus clementina; type=EST; length=657bpback to top |