FC924972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.299e-55 Identity = 104/176 (59.09%), Postives = 132/176 (75.00%), Query Frame = 1 Query: 130 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 T F D+AG E ++ E+V++LK P+++ A GAR PKG+LL GPPGTGKTLLAKA AGEA VPFF IS S FVE++VG+GA RVR++FK+A++ AP I+F+DE+DAV NDEREQTLNQ+L EMDG N GI+++ ATNR D+LD ALLRPGRFDR +TV +P Sbjct: 207 TDKKFTDIAGNKEPIEEVQELVDYLKNPKKYAAAGARFPKGILLGGPPGTGKTLLAKATAGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIGGGNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLP 382
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 1.696e-55 Identity = 108/181 (59.67%), Postives = 133/181 (73.48%), Query Frame = 1 Query: 115 QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 Q ++ F DV GVDEAK + E+V +L+ P+RFT +G ++PKGVLLVGPPGTGKT+LA+AIAGEAGVPFFS SGSEF EMFVGVGA RVRDLF AK+ +PCI+F+DEIDA+ + TLNQ+L E+DGF+ N GIIV+AATN + LD AL+RPGRFDR + V P Sbjct: 217 QPSMDSSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAI---GGSRNPKDQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNP 394
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH9_ORYSJ (Cell division protease ftsH homolog 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 2.893e-55 Identity = 111/173 (64.16%), Postives = 129/173 (74.57%), Query Frame = 1 Query: 139 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 TF DV G D+AK++ EVVE+LK P +FT +G ++PKG+LL G PGTGKTLLAKAIAGEAGVPFF +GSEF EMFVGVGA RVR LF+ AK+ APCIVF+DEIDAV ++TL+QLL EMDGFE N GIIV+AATN DILD AL RPGRFDR + V P Sbjct: 326 TFKDVKGCDDAKKELEEVVEYLKNPSKFTRLGGKLPKGILLTGSPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIVFIDEIDAV----GSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPNP 494
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.935e-55 Identity = 108/172 (62.79%), Postives = 128/172 (74.42%), Query Frame = 1 Query: 142 FDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 F DV GVDEAK + E+V +L+ P+RFT +G ++PKGVLLVGPPGTGKT+LA+A+AGEAGVPFFS SGSEF EMFVGVGA RVRDLF AK+ +PCI+F+DEIDA+ TLNQLL E+DGF+ N GIIVIAATN LD AL+RPGRFDR + V P Sbjct: 222 FSDVKGVDEAKAELEEIVHYLRDPKRFTHLGGKLPKGVLLVGPPGTGKTMLARAVAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAI---GGSRNPKDQQYMRMTLNQLLVELDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNP 390
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.875e-54 Identity = 105/177 (59.32%), Postives = 132/177 (74.58%), Query Frame = 1 Query: 127 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 NT V+F DV G DE K++ ++VVEFL+ PE+F IGA++PKGVLLVGPPG GKTLLAKA++GEA VPF SGS F E+ VG+GASR+R LF AK+N+PC+VF+DEID+V + QT+NQLL EMDGF+ GIIV+ ATN+A++LD ALLRPGRFD Q+ V P Sbjct: 160 NTDVSFSDVQGCDEVKKELVDVVEFLRNPEKFNQIGAKLPKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSV--GGNRTFSPHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPP 334
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.074e-53 Identity = 104/176 (59.09%), Postives = 132/176 (75.00%), Query Frame = 1 Query: 133 GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 GV+F DVAG+ EAK + E V++LK PERF +GA++PKG LL+GPPG GKTLLAKA+A EA VPF +++G EFVE+ G+GA+RVR LFK+A+ APCIV++DEIDAV N E EQTLNQLL EMDG +IV+A+TNRAD+LD+AL+RPGR DR V +D+P Sbjct: 305 GVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLP 480
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 2.708e-53 Identity = 105/176 (59.66%), Postives = 131/176 (74.43%), Query Frame = 1 Query: 133 GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 GV+F DVAG+ EAK + E V++LK PERF +GA++PKG LL+GPPG GKTLLAKA+A EA VPF +++G EFVE+ G+GA+RVR LFK+A+ APCIV++DEIDAV N E EQTLNQLL EMDG +IV+A+TNRADILD AL+RPGR DR V +D+P Sbjct: 305 GVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLP 480
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.537e-53 Identity = 104/176 (59.09%), Postives = 132/176 (75.00%), Query Frame = 1 Query: 133 GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 GV+F DVAG+ EAK + E V++LK PERF +GA++PKG LL+GPPG GKTLLAKA+A EA VPF +++G EFVE+ G+GA+RVR LFK+A+ APCIV++DEIDAV N E EQTLNQLL EMDG +IV+A+TNRAD+LD+AL+RPGR DR V +D+P Sbjct: 305 GVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLP 480
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: YME1_CAEEL (Protein YME1 homolog OS=Caenorhabditis elegans GN=ymel-1 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 2.994e-52 Identity = 106/166 (63.86%), Postives = 126/166 (75.90%), Query Frame = 1 Query: 160 VDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 +DEAK + E+V++LK PE+++ +G R+PKGVLLVGPPGTGKTLLA+AIAGEA VPFF +GSEF E+ VG GA RVRDLF KAK APCI+F+DEID+V + QT+NQLL+EMDGF N GIIVIAATNR D LD ALLRPGRFD +VTV P Sbjct: 206 MDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSV--GSKRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKP 369
BLAST of FC924972 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 6.670e-52 Identity = 100/176 (56.82%), Postives = 128/176 (72.73%), Query Frame = 1 Query: 130 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVP 657 T V FDDV G DEA+ + E+V+FLK P ++ ++G ++PKGVLL GPPGTGKTLLA+A AGEAGV FF +SGSEF E++VGVGA R+RDLF +A+ AP I+F+DE+DA+ +QTLNQLL E+DGF +GII+I ATN + LD AL RPGRFD+ V VD+P Sbjct: 276 TNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQAY---AKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLP 448 The following BLAST results are available for this feature:
BLAST of FC924972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC924972 ID=FC924972; Name=FC924972; organism=Citrus clementina; type=EST; length=657bpback to top |