FC924976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_STAAR (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252) GN=relA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 KLTMDEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 283 K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLE+QIRT +MH AE G AAHW YKEG Sbjct: 263 KKQFDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGPNGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_STAAN (GTP pyrophosphokinase OS=Staphylococcus aureus (strain N315) GN=relA PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 KLTMDEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 283 K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLE+QIRT +MH AE G AAHW YKEG Sbjct: 263 KKQFDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGPNGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_STAAM (GTP pyrophosphokinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=relA PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 KLTMDEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 283 K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLE+QIRT +MH AE G AAHW YKEG Sbjct: 263 KKQFDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGPNGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_STREQ (Putative GTP pyrophosphokinase OS=Streptococcus equisimilis GN=relA PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.086e-22 Identity = 48/94 (51.06%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 2 KLTMDEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 283 K D+I D+ +R ++E + D Y + +H+LW +PG+ KDYI PK NGYQS+HT V G P+E+QIRTKEMH AE+G AAHW YK+G Sbjct: 256 KKRFDQIFDLIAIRCVMETQSDVYAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTVYGP-KGPIEIQIRTKEMHQVAEYGVAAHWAYKKG 348
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: SPOT_AQUAE (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Aquifex aeolicus GN=spoT PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.568e-21 Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = 2 Query: 5 LTMDEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFVLQMVE 322 + ++++HDI G+R+IV +CY L ++H L+ VPGK KDYI+ PK N YQSLHT V + +E QIRT EMH +AE G A+HW YKEG D S++ ++VE Sbjct: 254 IRLEDVHDILGVRIIVNTVPECYTVLGIIHSLFRPVPGKFKDYISLPKPNLYQSLHTTVIADKGKLVEFQIRTWEMHERAEKGIASHWAYKEGKNPSDAGVYSWLRELVE 363
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: SPOT_SHIFL (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Shigella flexneri GN=spoT PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.561e-21 Identity = 52/115 (45.22%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 20 IHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 364 I DI+ R+IV + + CY+ L +H L+ PG++KDYI PK NGYQSLHT + G VP+EVQIRT++M AE G AAHW YKE ++ ++ W + +L Q A S Sbjct: 257 IMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGS 371
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: SPOT_ECOLI (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Escherichia coli (strain K12) GN=spoT PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.561e-21 Identity = 52/115 (45.22%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 20 IHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 364 I DI+ R+IV + + CY+ L +H L+ PG++KDYI PK NGYQSLHT + G VP+EVQIRT++M AE G AAHW YKE ++ ++ W + +L Q A S Sbjct: 257 IMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGS 371
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: SPOT_ECO57 (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Escherichia coli O157:H7 GN=spoT PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.561e-21 Identity = 52/115 (45.22%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 20 IHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 364 I DI+ R+IV + + CY+ L +H L+ PG++KDYI PK NGYQSLHT + G VP+EVQIRT++M AE G AAHW YKE ++ ++ W + +L Q A S Sbjct: 257 IMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGS 371
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: SPOT_SPICI (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Spiroplasma citri GN=spoT PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.264e-20 Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 14 DEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 286 D+IHDI +R+I + +DCY+ L VHQ + + + KDYI PK N YQSLHT + + + EVQIRT+EM AE G AAHWRYKEG+ Sbjct: 260 DDIHDILAVRIITNSVDDCYKVLGFVHQHYTPLNNRFKDYIATPKHNLYQSLHTTIVADDGLIFEVQIRTEEMDELAEQGVAAHWRYKEGE 350
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RSH_BRUSU (GTP pyrophosphokinase rsh OS=Brucella suis GN=rsh PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.264e-20 Identity = 44/92 (47.83%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 5 LTMDEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 280 L+ +++ DI G R++V+ +DCY+AL ++H W+ VPG+ KDYI+ PK N Y+S+HT + G +E+QIRT+EM AEFG AAH YK+ Sbjct: 252 LSFEQLSDIFGFRVMVDTVQDCYRALGLIHTTWSMVPGRFKDYISTPKQNDYRSIHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKD 343 The following BLAST results are available for this feature:
BLAST of FC924976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924976 ID=FC924976; Name=FC924976; organism=Citrus clementina; type=EST; length=751bpback to top |