FC924978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924978 vs. ExPASy Swiss-Prot
Match: CLIC4_RAT (Chloride intracellular channel protein 4 OS=Rattus norvegicus GN=Clic4 PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 59/226 (26.11%), Postives = 106/226 (46.90%), Query Frame = 3 Query: 51 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEPSL----TNPPEFASVGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT-KAEKQYVIA 659 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + I +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K+ F+ G+++T D +L PKL+ ++V + ++ + +P+ + + Y ++ + F T ++K+ IA Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPAHLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPGEIDENSMEDIKSSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
BLAST of FC924978 vs. ExPASy Swiss-Prot
Match: CLIC4_PONAB (Chloride intracellular channel protein 4 OS=Pongo abelii GN=CLIC4 PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 3.971e-15 Identity = 59/226 (26.11%), Postives = 105/226 (46.46%), Query Frame = 3 Query: 51 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEPSL----TNPPEFASVGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT-KAEKQYVIA 659 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + I +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G+++T D +L PKL+ ++V + ++ + +P+ + + Y ++ + F T ++K+ IA Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVSTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
BLAST of FC924978 vs. ExPASy Swiss-Prot
Match: CLIC4_MOUSE (Chloride intracellular channel protein 4 OS=Mus musculus GN=Clic4 PE=1 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 6.773e-15 Identity = 59/226 (26.11%), Postives = 105/226 (46.46%), Query Frame = 3 Query: 51 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEPSL----TNPPEFASVGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT-KAEKQYVIA 659 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + I +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G+++T D +L PKL+ ++V + ++ + +P+ + + Y ++ + F T ++K+ IA Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
BLAST of FC924978 vs. ExPASy Swiss-Prot
Match: CLIC4_BOVIN (Chloride intracellular channel protein 4 OS=Bos taurus GN=CLIC4 PE=2 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 6.773e-15 Identity = 59/226 (26.11%), Postives = 105/226 (46.46%), Query Frame = 3 Query: 51 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEPSL----TNPPEFASVGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT-KAEKQYVIA 659 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+++ D + I +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G ++T D +L PKL+ ++V + ++ + +P+ + + Y ++ + F T ++K+ IA Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNNEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
BLAST of FC924978 vs. ExPASy Swiss-Prot
Match: CLIC4_HUMAN (Chloride intracellular channel protein 4 OS=Homo sapiens GN=CLIC4 PE=1 SV=4) HSP 1 Score: 80.8777 bits (198), Expect = 8.846e-15 Identity = 59/226 (26.11%), Postives = 104/226 (46.02%), Query Frame = 3 Query: 51 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEPSL----TNPPEFASVGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT-KAEKQYVIA 659 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + I +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G ++T D +L PKL+ ++V + ++ + +P+ + + Y ++ + F T ++K+ IA Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
BLAST of FC924978 vs. ExPASy Swiss-Prot
Match: CLIC2_HUMAN (Chloride intracellular channel protein 2 OS=Homo sapiens GN=CLIC2 PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 8.846e-15 Identity = 60/224 (26.79%), Postives = 105/224 (46.88%), Query Frame = 3 Query: 51 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVIVRIIEE-----KYPEPSLTNPPEFASVGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLKT----------------HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEKQYV 653 +E+ VKA I G+CPF QR + L K V + ++++ KP+ +++P P + ++ + D I +E+ +YP S F VG +F F ++K+ K+ N E++LL+E K LD++L T F+ G+++T D SL PKL ++VA + ++ + +P + V Y +A E F T E + + Sbjct: 14 IELFVKAGSDGESI-GNCPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDLAPGTNPPFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESF-DVGCNLFAKFSAYIKNTQKEANKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADCSLLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEI 235
BLAST of FC924978 vs. ExPASy Swiss-Prot
Match: CLIC2_RAT (Chloride intracellular channel protein 2 OS=Rattus norvegicus GN=Clic2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.574e-14 Identity = 61/224 (27.23%), Postives = 103/224 (45.98%), Query Frame = 3 Query: 51 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVIVRIIEE-----KYPEPSLTNPPEFASVGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLKT----------------HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEKQYV 653 +E+ VKA I G+CPF QR + L K V + I+ + KP+ +++P P + ++ + D I +E+ +YP S F VG +F F ++K+ K+ N E++LL E K LD++L T F+ G+++T D SL PKL ++VA + ++ + +P + V Y +A E F T E + + Sbjct: 14 IELFVKAGSDGESI-GNCPFCQRLFMILWLKGVKFNVTTIDTARKPEELKDLAPGTNPPFLIYNKELKTDFIKIEEFLEKTLAPPRYPHLSPKYKESF-DVGCNLFAKFSAYIKNTQKEANKNFEKSLLREFKRLDDYLNTPLLDEIDPDSTEERTLSRRLFLDGDQLTLADCSLLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFAHTCPEDKEI 235
BLAST of FC924978 vs. ExPASy Swiss-Prot
Match: CLIC5_RAT (Chloride intracellular channel protein 5 OS=Rattus norvegicus GN=Clic5 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.361e-14 Identity = 58/219 (26.48%), Postives = 104/219 (47.49%), Query Frame = 3 Query: 51 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVIVRIIE-----EKYPEPSLTNPPEFASVGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHL----------KTHGG------PFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKA 638 +E+ VKA + I G+CPFSQR + L K V + +++ KP ++P P + F+ D + I +E EKYP+ + + E + G IF F ++K+ + N E+ L + L+ LD++L THG F+ G+++T D +L PKL+ +++ + ++ + +P + + Y K +A + F T A Sbjct: 16 IELFVKAGIDGESI-GNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAARH-RESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALRKLDDYLNTPLPEEIDTNTHGDEKGSQRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCA 232
BLAST of FC924978 vs. ExPASy Swiss-Prot
Match: CLIC5_MOUSE (Chloride intracellular channel protein 5 OS=Mus musculus GN=Clic5 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.361e-14 Identity = 58/219 (26.48%), Postives = 104/219 (47.49%), Query Frame = 3 Query: 51 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVIVRIIE-----EKYPEPSLTNPPEFASVGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHL----------KTHGG------PFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKA 638 +E+ VKA + I G+CPFSQR + L K V + +++ KP ++P P + F+ D + I +E EKYP+ + + E + G IF F ++K+ + N E+ L + L+ LD++L THG F+ G+++T D +L PKL+ +++ + ++ + +P + + Y K +A + F T A Sbjct: 16 IELFVKAGIDGESI-GNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKH-RESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALRKLDDYLNSPLPEEIDTNTHGDEKGSQRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCA 232
BLAST of FC924978 vs. ExPASy Swiss-Prot
Match: CLIC3_HUMAN (Chloride intracellular channel protein 3 OS=Homo sapiens GN=CLIC3 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14 Identity = 61/240 (25.42%), Postives = 104/240 (43.33%), Query Frame = 3 Query: 39 AKMAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEPSLTNPPEFASV----------GSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHLKTH------GGP--------FIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEKQYVIAGWVPKVN 680 A+ +++ VKA+ + G CP QR + L K VP+ ++ P + +P ++P++ +D D+ I +EE PP+F S+ G+ +F F F+K+ P ++ Q LL L LD +L+ G P F+ G+++T D SL PKL+ + HF+Q +P L V Y + F+ T ++A + P V+ Sbjct: 2 AETKLQLFVKASEDGESV-GHCPSCQRLFMVLLLKGVPFTLTTVDTRRSPDVLKDFAPGSQLPILLYDSDAKTDTLQIEDFLEETL------GPPDFPSLAPRYRESNTAGNDVFHKFSAFIKNPVPAQDEALYQQLLRALARLDSYLRAPLEHELAGEPQLRESRRRFLDGDRLTLADCSLLPKLHIVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHSAEILAAYRPAVH 234 The following BLAST results are available for this feature:
BLAST of FC924978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924978 ID=FC924978; Name=FC924978; organism=Citrus clementina; type=EST; length=783bpback to top |