FC924986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRASO (50S ribosomal protein L7/L12 OS=Bradyrhizobium sp. (strain ORS278) GN=rplL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14 Identity = 48/133 (36.09%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 IVD++S L+++E +LA ++ K G+ + V PG G + F + L G + K++VIKEVR TGLGLKE+K+LVE P +K GV K+EA+KI +L++ GA+V ++ Sbjct: 7 IVDDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAAPGGGGAAAAPAEEKTE-------------FTVVLASAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKEEAEKIKGQLEKAGAKVELK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRAJA (50S ribosomal protein L7/L12 OS=Bradyrhizobium japonicum GN=rplL PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.157e-14 Identity = 49/133 (36.84%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 IVD++S L+++E +LA ++ K G+ + V P G + F + L G E K++VIKEVR TGLGLKE+K+LVE P +K GV KDEA+KI +L++ GA+V ++ Sbjct: 7 IVDDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAGPAGGGAAAAPAEEKTE-------------FTVVLASAG-EKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKDEAEKIKVQLEKAGAKVELK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BARBK (50S ribosomal protein L7/L12 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rplL PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.157e-14 Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G + FD+ L GA+ K+ VIKEVR TGLGLKE+K+LVE P +K GV+KDEA+KI A+L+ GA++ ++ Sbjct: 4 LAKIVEDLSNLTVLEAAELSKLLEEKWGVSAAAPVAVAAVGSAAAPAAEEKTE---------------FDVVLVDGGAQ-KINVIKEVRALTGLGLKEAKDLVEGAPKPIKEGVSKDEAEKIKAQLEAAGAKIELK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: MNP1_SCHPO (60 ribosomal protein L12, mitochondrial OS=Schizosaccharomyces pombe GN=mnp1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.157e-14 Identity = 55/184 (29.89%), Postives = 92/184 (50.00%), Query Frame = 1 Query: 1 RHLRFITLHVSRNFKSSLQNPRSATNSHLLNRISARDYCTPSQEPSEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 R+LR L S+N+ SL N RS + + Q + ++ +VD+IS LSL+E +L ++ KL I E+ M + P + + ++LKLE + A +K KVIKEV+ GL L ++K+ VE P +LK + K++A+ I +KL+++ +V +E Sbjct: 43 RNLR--ALSSSKNWARSLVNTRSFRAAASV------------QNNNAQIGEMVDKISSLSLLETSELVKQLKEKLNIAEIAPMAAVAPAVASAAPSEEKAPEEKKEEKTT------WNLKLESFDAGSKAKVIKEVKSLLGLSLVDAKKFVESAPKVLKENILKEDAEAIKSKLEKLSCKVVLE 206
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_SPHWW (50S ribosomal protein L7/L12 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rplL PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +VD++S L+++E +L+ ++ K G+ + V P G FD+ L G G + K+ VIKEVR TGLGL E+K LVE P +K GV KDEA+K+ +L+E GA V ++ Sbjct: 7 LVDDLSALTVLEAAELSKLLEEKWGVSAAAAVAVAAPAGGAGAGAPAAEVKDE------------FDVILTGDGGK-KINVIKEVRAITGLGLTEAKTLVESAPKAVKEGVNKDEAEKLKKQLEEAGATVELK 126
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_NITHX (50S ribosomal protein L7/L12 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rplL PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM-PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 IVD++S L+++E +LA ++ K G+ + V PG G + F + L G + K++VIKEVR TGLGLKE+K+LVE P +K GV KDEA+K+ A+L++ GA+V ++ Sbjct: 7 IVDDLSALTVLEAAELAKLLEEKWGVSAAAAVAVAAAPGAGAAAAAEEQTE---------------FTVVLAAAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKDEAEKLKAQLEKAGAKVELK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_CHLP8 (50S ribosomal protein L7/L12 OS=Chlorobaculum parvum (strain NCIB 8327) GN=rplL PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSM 549 + ++V+EI L+L E +L + K G+ P V+ GM + FD+ L+ GA+ K+ VIK VR TGLGLKE+KE+V+ P +K V+KDEA+KI +LK+ GA+V + Sbjct: 4 IETLVEEIGKLTLTEASELVKALEEKFGVSAAP--AVVAGGMAAAPAGEAAAAEEKTE----------FDVVLKAAGAQ-KINVIKVVRAITGLGLKEAKEMVDGAPKTVKEAVSKDEAEKIAKELKDAGAEVEL 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRUSU (50S ribosomal protein L7/L12 OS=Brucella suis GN=rplL PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G FD+ L GA K+ VIKEVR TGLGLKE+K+LVE P +K G +KDEA+KI A+L+ GA+V ++ Sbjct: 4 LAKIVEDLSALTVLEAAELSKLLEEKWGVSAAAPVAVAAAG--------------GAAPAAAAEEKTEFDVVLADGGAN-KINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKAQLEAAGAKVELK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRUSI (50S ribosomal protein L7/L12 OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=rplL PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G FD+ L GA K+ VIKEVR TGLGLKE+K+LVE P +K G +KDEA+KI A+L+ GA+V ++ Sbjct: 4 LAKIVEDLSALTVLEAAELSKLLEEKWGVSAAAPVAVAAAG--------------GAAPAAAAEEKTEFDVVLADGGAN-KINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKAQLEAAGAKVELK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRUME (50S ribosomal protein L7/L12 OS=Brucella melitensis GN=rplL PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G FD+ L GA K+ VIKEVR TGLGLKE+K+LVE P +K G +KDEA+KI A+L+ GA+V ++ Sbjct: 4 LAKIVEDLSALTVLEAAELSKLLEEKWGVSAAAPVAVAAAG--------------GAAPAAAAEEKTEFDVVLADGGAN-KINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKAQLEAAGAKVELK 124 The following BLAST results are available for this feature:
BLAST of FC924986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924986 ID=FC924986; Name=FC924986; organism=Citrus clementina; type=EST; length=757bpback to top |