FC924986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRUMB (50S ribosomal protein L7/L12 OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=rplL PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G FD+ L GA K+ VIKEVR TGLGLKE+K+LVE P +K G +KDEA+KI A+L+ GA+V ++ Sbjct: 4 LAKIVEDLSALTVLEAAELSKLLEEKWGVSAAAPVAVAAAG--------------GAAPAAAAEEKTEFDVVLADGGAN-KINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKAQLEAAGAKVELK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRUC2 (50S ribosomal protein L7/L12 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=rplL PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G FD+ L GA K+ VIKEVR TGLGLKE+K+LVE P +K G +KDEA+KI A+L+ GA+V ++ Sbjct: 4 LAKIVEDLSALTVLEAAELSKLLEEKWGVSAAAPVAVAAAG--------------GAAPAAAAEEKTEFDVVLADGGAN-KINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKAQLEAAGAKVELK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRUAB (50S ribosomal protein L7/L12 OS=Brucella abortus GN=rplL PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G FD+ L GA K+ VIKEVR TGLGLKE+K+LVE P +K G +KDEA+KI A+L+ GA+V ++ Sbjct: 4 LAKIVEDLSALTVLEAAELSKLLEEKWGVSAAAPVAVAAAG--------------GAAPAAAAEEKTEFDVVLADGGAN-KINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKAQLEAAGAKVELK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRUA2 (50S ribosomal protein L7/L12 OS=Brucella abortus (strain 2308) GN=rplL PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G FD+ L GA K+ VIKEVR TGLGLKE+K+LVE P +K G +KDEA+KI A+L+ GA+V ++ Sbjct: 4 LAKIVEDLSALTVLEAAELSKLLEEKWGVSAAAPVAVAAAG--------------GAAPAAAAEEKTEFDVVLADGGAN-KINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKAQLEAAGAKVELK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRUA1 (50S ribosomal protein L7/L12 OS=Brucella abortus (strain S19) GN=rplL PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G FD+ L GA K+ VIKEVR TGLGLKE+K+LVE P +K G +KDEA+KI A+L+ GA+V ++ Sbjct: 4 LAKIVEDLSALTVLEAAELSKLLEEKWGVSAAAPVAVAAAG--------------GAAPAAAAEEKTEFDVVLADGGAN-KINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKAQLEAAGAKVELK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_SYNJB (50S ribosomal protein L7/L12 OS=Synechococcus sp. GN=rplL PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 133 PSEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 PSE+VA I++E+ LSL+E +L + G+ M+ + FD+ LE A+ K+ ++K VR TGLGLK++K+LVE P +K GV K+EA+ I KL+E GA V ++ Sbjct: 2 PSERVAKILEELKALSLLEASELVKAIEETFGVSAAAPAGGMVMAAPVAAAAAAPAAAPEPVEEQTA-----FDVILEAVPADKKIAILKVVRELTGLGLKDAKDLVEAAPKPVKEGVAKEEANDIKKKLEEAGATVKIK 136
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_SYNJA (50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplL PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 136 SEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 SE+V I++E+ LSL+E +L + G+ + GM + FD+ LE A+ K+ V+K VR TGLGLK++K+LVE P +K G+ K+EA++I KL+E GA V ++ Sbjct: 3 SERVQKILEELKALSLLEASELVKAIEEAFGV----SAAAPAGGMVMAAPVAAAAAPAPAAAPEPVEEQTAFDVILEAVPADKKIAVLKVVRELTGLGLKDAKDLVEAAPKPVKEGIPKEEANEIKKKLEEAGATVKVK 137
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_CAMHC (50S ribosomal protein L7/L12 OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=rplL PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +++ IS LS++E+ +L K G+ P M G G + FDL L GAE K+KVIK VR TGLGLKE+K+ VEK P++LK G+ K++A+K A L+ GA+V ++ Sbjct: 8 VLEYISNLSVLELSELVKEFEEKFGVSAAPVMVAGGAGAGAAAAAEEKTE---------------FDLVLTDTGAE-KIKVIKAVRAITGLGLKEAKDAVEKTPSVLKEGMNKEDAEKAKADLEAAGAKVELK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_RHOPT (50S ribosomal protein L7/L12 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rplL PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13 Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM-PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 IVD++S L+++E +LA ++ K G+ + V PG G + F + L G + K++VIKEVR TGLGLKE+K+LVE P LK GV K+EA+K+ A+L++ GA+V ++ Sbjct: 7 IVDDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAAAPGAGGAAAPAEEKTE--------------FTVVLASAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPLKEGVNKEEAEKVKAQLEKAGAKVELK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_RHOPA (50S ribosomal protein L7/L12 OS=Rhodopseudomonas palustris GN=rplL PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13 Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM-PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 IVD++S L+++E +LA ++ K G+ + V PG G + F + L G + K++VIKEVR TGLGLKE+K+LVE P LK GV K+EA+K+ A+L++ GA+V ++ Sbjct: 7 IVDDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAAAPGAGGAAAPAEEKTE--------------FTVVLASAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPLKEGVNKEEAEKVKAQLEKAGAKVELK 125 The following BLAST results are available for this feature:
BLAST of FC924986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924986 ID=FC924986; Name=FC924986; organism=Citrus clementina; type=EST; length=757bpback to top |