FC924986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_RHOP5 (50S ribosomal protein L7/L12 OS=Rhodopseudomonas palustris (strain BisA53) GN=rplL PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 IVD++S L+++E +LA ++ K G+ + V P + F + L G + K++VIKEVR TGLGLKE+K+LVE P +K GV KDEA+K+ A+L++ GA+V ++ Sbjct: 7 IVDDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAGPAAAAAAPAEEKTE---------------FTVVLASAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKDEAEKVKAQLEKAGAKVELK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_MICLU (50S ribosomal protein L7/L12 OS=Micrococcus luteus GN=rplL PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13 Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 349 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 FD+ L GAE K+KVIK VR TGLGLKE+KE+V+ P LK GV+KDEA++I AKL+EVGA V ++ Sbjct: 52 FDVVLASAGAE-KIKVIKVVREITGLGLKEAKEVVDNAPKALKEGVSKDEAEEIKAKLEEVGASVEVK 118
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_METRJ (50S ribosomal protein L7/L12 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=rplL PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13 Identity = 48/137 (35.04%), Postives = 76/137 (55.47%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM-PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A +VD++S L+++E DLA ++ K G+ + V P G + F + L G + K++VIKEVR TGLGLKE+K+LVE P +K GV KDEA+K+ A+L++ GA++ ++ Sbjct: 4 LAKLVDDLSSLTVLEAADLAKMLEEKWGVSAAAAVAVAAGPAAGGAAAAVEEQTE--------------FTVVLASAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVAKDEAEKLKAQLEKAGAKIELK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_LIBAF (50S ribosomal protein L7/L12 OS=Liberibacter africanus GN=rplL PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13 Identity = 45/133 (33.83%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQV 543 + SIV+++S L+L++ +L+ + + G+ + V+ G S F++ LEG+ A+ K+ VIKEVR T LGLKE+K+ VE P LK GV+KDEA+++ KL+ GA + Sbjct: 4 IESIVEKLSSLTLLQAAELSKRLEEEWGVSAAAPVAVVASAAGESAAAVAEKTE--------------FEVFLEGFDAKKKISVIKEVRAITELGLKEAKDFVESAPKSLKTGVSKDEAEELKKKLEAAGATI 122
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_NITWN (50S ribosomal protein L7/L12 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rplL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13 Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM-PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 IVD++S L+++E +LA ++ K G+ + V PG G F + L G + K++VIKEVR TGLGLKE+K+LVE P +K GV KDEA+KI A+L++ G +V ++ Sbjct: 7 IVDDLSALTVLEAAELAKLLEEKWGVSAAAAVAVAAAPGAG--------------GGAPAAEEKTEFTVVLAAAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVAKDEAEKIKAQLEKAGGKVELK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_METNO (50S ribosomal protein L7/L12 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13 Identity = 49/137 (35.77%), Postives = 76/137 (55.47%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM-PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A +VD++S L+++E +LA ++ K G+ + V P G + F + L G G + K++VIKEVR TGLGLKE+K+LVE P +K V KDEA+KI A+L++ GA+V ++ Sbjct: 4 LAKLVDDLSSLTVLEAAELAKMLEEKWGVSAAAAVAVAAGPAAGGAAAPAVEEKTE-------------FTVVLAGAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKESVAKDEAEKIKAQLEKAGAKVELK 126
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_LISMH (50S ribosomal protein L7/L12 OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=rplL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13 Identity = 48/136 (35.29%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 + I+ + S++E+ DL + + G+ + V G G + F ++L G ++K+KVIK VR TGLGLKE+KELV+ P LK GV KDEA++I AKL+EVGA V ++ Sbjct: 5 IEEIIASVKEASVLELNDLVKAIEEEFGVTAAAPVAVAAAGGGAAEQTE-------------------FTVELASAG-DSKIKVIKVVREITGLGLKEAKELVDNAPKALKEGVAKDEAEEIKAKLEEVGANVEVK 120
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_LISIN (50S ribosomal protein L7/L12 OS=Listeria innocua GN=rplL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13 Identity = 48/136 (35.29%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 + I+ + S++E+ DL + + G+ + V G G + F ++L G ++K+KVIK VR TGLGLKE+KELV+ P LK GV KDEA++I AKL+EVGA V ++ Sbjct: 5 IEEIIASVKEASVLELNDLVKAIEEEFGVTAAAPVAVAAAGGGAAEQTE-------------------FTVELASAG-DSKIKVIKVVREITGLGLKEAKELVDNAPKALKEGVAKDEAEEIKAKLEEVGANVEVK 120
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_COXBU (50S ribosomal protein L7/L12 OS=Coxiella burnetii GN=rplL PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13 Identity = 44/133 (33.08%), Postives = 75/133 (56.39%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ ++ +S+++V+DL + K G+ + V P G F++K+ +G + K+ VIK +R TGLGLKE+K+LVE VP+++K V+K+EA+KI +L+E GA+V +E Sbjct: 9 ILEAVANMSVMDVVDLVKAMEEKFGVSAQAAIAVAGPVAG--------------GEAAAAEEKTEFNVKMVSFG-DNKIGVIKAIRTITGLGLKEAKDLVESVPSVVKESVSKEEAEKIKKELEEAGAKVELE 126
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_COXBR (50S ribosomal protein L7/L12 OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=rplL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13 Identity = 44/133 (33.08%), Postives = 75/133 (56.39%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ ++ +S+++V+DL + K G+ + V P G F++K+ +G + K+ VIK +R TGLGLKE+K+LVE VP+++K V+K+EA+KI +L+E GA+V +E Sbjct: 9 ILEAVANMSVMDVVDLVKAMEEKFGVSAQAAIAVAGPVAG--------------GEAAAAEEKTEFNVKMVSFG-DNKIGVIKAIRTITGLGLKEAKDLVESVPSVVKESVSKEEAEKIKKELEEAGAKVELE 126 The following BLAST results are available for this feature:
BLAST of FC924986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924986 ID=FC924986; Name=FC924986; organism=Citrus clementina; type=EST; length=757bpback to top |