FC924986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_DESPS (50S ribosomal protein L7/L12 OS=Desulfotalea psychrophila GN=rplL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 48/133 (36.09%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 ++D I+ +S++E+ +L K G+ + V G+ FD+ L G+E K+KVIKEVR TGLGLKE+K LVE P LK GV+KDEA ++ AKL+ VGA ++ Sbjct: 8 VIDFIAGMSVLELSELIGEFEEKFGVSAAAPVAVAAAGVAAEAVEEKTE----------------FDVILASAGSE-KIKVIKEVRAITGLGLKEAKSLVESAPAALKEGVSKDEAAELKAKLEAVGATAEVK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_SYNPW (50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain WH7803) GN=rplL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 44/139 (31.65%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 136 SEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 S K I++ + LSL+E +L + G+ + V+M G + FD+ LE + A AK+KV+K VR TGLGL ++K +VE P +K GV+KDEA+ + ++EVG +V+++ Sbjct: 2 SAKTDEILESLKTLSLLEASELVKQIEEAFGVSAAASAGVVMAAPGAAGAGGGEAAEEKTE----------FDVVLESFDASAKIKVLKAVREATGLGLGDAKAMVEAAPKAIKEGVSKDEAEALKKAIEEVGGKVTLK 130
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_RHOPS (50S ribosomal protein L7/L12 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 48/134 (35.82%), Postives = 74/134 (55.22%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM-PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 IVD++S L+++E +LA ++ K G+ + V PG + F + L G + K++VIKEVR TGLGLKE+K+LVE P +K GV KDEA+K+ A+L++ GA+V ++ Sbjct: 7 IVDDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAAAPGAAAAAVEEKTE----------------FTVVLASAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPIKEGVNKDEAEKLKAQLEKAGAKVELK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_RHOP2 (50S ribosomal protein L7/L12 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 48/134 (35.82%), Postives = 74/134 (55.22%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM-PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 IVD++S L+++E +LA ++ K G+ + V PG + F + L G + K++VIKEVR TGLGLKE+K+LVE P +K GV K+EADK+ A+L++ GA+V ++ Sbjct: 7 IVDDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAAAPGAAAAAVEEKTE----------------FTVMLAAAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKEEADKLKAQLEKAGAKVELK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_METEP (50S ribosomal protein L7/L12 OS=Methylobacterium extorquens (strain PA1) GN=rplL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM-PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +LA ++ K G+ + V P G F + L G + K++VIKEVR TGLGLKE+K+LVE P +K G TKDEA+K+ A+L++ GA+V ++ Sbjct: 4 LAKIVEDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAAGPAAGAGAAAVEEQTE--------------FTVVLASAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGATKDEAEKLKAQLEKAGAKVELK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_METC4 (50S ribosomal protein L7/L12 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rplL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM-PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +LA ++ K G+ + V P G F + L G + K++VIKEVR TGLGLKE+K+LVE P +K G TKDEA+K+ A+L++ GA+V ++ Sbjct: 4 LAKIVEDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAAGPAAGAGAAAVEEQTE--------------FTVVLASAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGATKDEAEKLKAQLEKAGAKVELK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_MARMM (50S ribosomal protein L7/L12 OS=Maricaulis maris (strain MCS10) GN=rplL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 50/136 (36.76%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 VA + DE+ L+++E +L D++ K GIK + V P G FD+ L G G + K+ VIKEVR TGLGLKE+K+LVE P +K +K EA++I AKL+ GA V ++ Sbjct: 4 VAKLCDELLALTILEAKELNDLLEEK-GIKAAAAVAVAGPAGG--------------GDAPAAEEKDEFDVVLTGAG-DKKINVIKEVRAITGLGLKEAKDLVEGAPKAVKEAASKTEAEEIKAKLEAAGASVELK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_LISW6 (50S ribosomal protein L7/L12 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 + I+ + S++E+ DL + + G+ + V G G + F ++L G ++K+KVIK VR TGLGLKE+KELV+ P LK GV K+EA++I AKL+EVGA V ++ Sbjct: 5 IEEIIASVKEASVLELNDLVKAIEEEFGVTAAAPVAVAAAGGGAAEQTE-------------------FTVELSSAG-DSKIKVIKVVREITGLGLKEAKELVDNAPKALKEGVAKEEAEEIKAKLEEVGANVEVK 120
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_ENTS8 (50S ribosomal protein L7/L12 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=rplL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ +S +S+++V++L + K G+ + V G + FD+ L+ GA K+ VIK VRG TGLGLKE+K+LVE P LK GV+KD+A+ + L+E GA+V ++ Sbjct: 8 IIEAVSAMSVMDVVELISAMEEKFGVSAAAAVAVAAAGPAEAAEEKTE-----------------FDVILKAAGAN-KVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKSLEEAGAEVEVK 122
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BACCN (50S ribosomal protein L7/L12 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rplL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 46/133 (34.59%), Postives = 75/133 (56.39%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ + ++++E+ DL + + G+ + V+ G G + FD++L GA+ K+KVIK VR TGLGLKE+KELV+ P ++K G +K+EA++I AKL+EVGA V ++ Sbjct: 6 IIEAVKSMTVLELNDLVKAIEEEFGVTAAAPVAVV-GGAGEAAAEKTE-----------------FDVELANAGAQ-KIKVIKVVREITGLGLKEAKELVDNTPKVIKEGASKEEAEEIKAKLEEVGAAVEVK 119 The following BLAST results are available for this feature:
BLAST of FC924986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924986 ID=FC924986; Name=FC924986; organism=Citrus clementina; type=EST; length=757bpback to top |