FC924986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_AZOC5 (50S ribosomal protein L7/L12 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rplL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM-PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 + +VDE+S L+++E +LA ++ K G+ + V P G + F + L G + K++VIKEVR TGLGLKE+K+LVE P +K GV KDEA+K+ A+L++ GA+V ++ Sbjct: 4 LTKLVDELSSLTVLEAAELAKLLEEKWGVSAAAAVAVAAAPAAGGAAAAVEEQTE--------------FTVVLANAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVAKDEAEKLKAQLEKAGAKVELK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_PROM4 (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT 9211) GN=rplL PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 1 Query: 136 SEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMM--PGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 S+K I+D + LSL+E +L + G+ + V+M PG G FD+ LE + A AK+KV+KEVR TGLGL E+K +VE P +K G +K++A+ + ++ VG +V+++ Sbjct: 2 SKKTDEILDSLKSLSLLEASELVKQIEEAFGVSAAASAGVVMAAPGAG----------GGASAAGEAAEEKTEFDVILESFDAAAKIKVLKEVRNATGLGLGEAKAMVEAAPKTIKEGASKEDAEALKKAIEAVGGKVTLK 132
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_PECCP (50S ribosomal protein L7/L12 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rplL PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13 Identity = 44/133 (33.08%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ ++ +S+++V++L + K G+ + V FD+ L+G GA K+ VIK VRG TGLGLKE+K+LVE P +LK GV+KD+A+ + L+E GA+V ++ Sbjct: 8 ILEAVAAMSVMDVVELVSAMEEKFGVSAAAAVAVAA------------------GPAEVAEEKTEFDVVLKGIGAN-KVAVIKAVRGATGLGLKEAKDLVESAPAVLKEGVSKDDAEALKKSLEEAGAEVEVK 121
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_LIBAC (50S ribosomal protein L7/L12 OS=Liberibacter africanus subsp. capensis GN=rplL PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13 Identity = 43/135 (31.85%), Postives = 74/135 (54.81%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSM 549 + SIV+++S L+L++ +L+ + + G+ + + P + F++ LE + A++K+ VIKEVR T LGLKE+KELVE + L+ GV+KDEA+++ KL+ GA +S+ Sbjct: 4 IESIVEKLSSLTLIQAAELSKRLEEEWGVSASAPVAAVAPAVXXDVAVAEKTE---------------FEVFLESFDAKSKISVIKEVRSITDLGLKEAKELVEALLKSLRTGVSKDEANELKKKLEAAGATISL 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BACWK (50S ribosomal protein L7/L12 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplL PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13 Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 349 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 FD+ L GA+ K+KVIK VR TGLGLKE+KELV+ P +K GVTK+EA+++ AKL+EVGA V ++ Sbjct: 53 FDVVLASAGAQ-KIKVIKAVREITGLGLKEAKELVDNTPKAIKEGVTKEEAEEMKAKLEEVGAAVEVK 119
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BACSU (50S ribosomal protein L7/L12 OS=Bacillus subtilis GN=rplL PE=1 SV=4) HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13 Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 349 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 FDL L G G++ K+KVIK VR TGLGLKE+KELV+ P LK G+ K+EA+++ AKL+EVGA V ++ Sbjct: 57 FDLILAGAGSQ-KIKVIKVVREITGLGLKEAKELVDNTPKPLKEGIAKEEAEELKAKLEEVGASVEVK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BACA2 (50S ribosomal protein L7/L12 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rplL PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13 Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 349 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 FDL L G G++ K+KVIK VR TGLGLKE+KELV+ P LK G+ K+EA+++ AKL+EVGA V ++ Sbjct: 57 FDLILAGAGSQ-KIKVIKVVREITGLGLKEAKELVDNTPKPLKEGIAKEEAEELKAKLEEVGASVEVK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: MNP1_YEAST (54S ribosomal protein L12, mitochondrial OS=Saccharomyces cerevisiae GN=MNP1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13 Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 1 Query: 142 KVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGF----------SXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 K++ IV +IS L+L+E L + ++ L I E + MP GF + F +KL+ + + K KVIKEV+G GL L E+K+ VE P +LK V KD+A+KI L+++GA+VS+E Sbjct: 53 KISKIVQDISQLTLLETSSLINELKTVLNIPE-----ISMPMGGFMAGAAGAGAGNVPSSTGEAGSGAEEEAKPEAKTVFTVKLDSFDTKTKAKVIKEVKGLLGLSLVEAKKFVEAAPKVLKENVAKDDAEKIKKTLEDLGAKVSLE 194
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_GLUOX (50S ribosomal protein L7/L12 OS=Gluconobacter oxydans GN=rplL PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+E+S L+++E +L+ ++ K G+ + V G + F + L G + K+ VIKEVRG TGLGLKE+K+LVE P +K G +KDEA KI L++ GA+V ++ Sbjct: 4 LAKIVEELSALTVLEAAELSKMLEEKWGVSAAAPVAVAAAAAGGAAAAPAEEQTE-------------FTVVLADAG-DKKINVIKEVRGITGLGLKEAKDLVEGAPKTVKEGASKDEAAKIKKALEDAGAKVEVK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_CHLL2 (50S ribosomal protein L7/L12 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=rplL PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 + ++V+EI L+L E +L + K G+ P ++ G+ + FD+ L G E+K+ VIK VR TGLGLKE+K+LV+ P +K V+KDEA+KI +LK+VGA V ++ Sbjct: 3 IETLVEEIGKLTLTEASELVKALEEKFGVSAAP---AIVAGIASAAPAGDAPAQEEKTE---------FDVVLTSAG-ESKINVIKVVRALTGLGLKEAKDLVDGAPKTVKEAVSKDEAEKIAKELKDVGAGVELK 125 The following BLAST results are available for this feature:
BLAST of FC924986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924986 ID=FC924986; Name=FC924986; organism=Citrus clementina; type=EST; length=757bpback to top |