FC924986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BACP2 (50S ribosomal protein L7/L12 OS=Bacillus pumilus (strain SAFR-032) GN=rplL PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 349 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 FDL L G G + K+KVIK VR TGLGLKE+KELV+ P LK G+ K+EA+++ AKL+EVGA V ++ Sbjct: 55 FDLVLAGAG-DQKIKVIKVVREITGLGLKEAKELVDNTPKPLKEGIAKEEAEELKAKLEEVGASVEVK 121
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BACLD (50S ribosomal protein L7/L12 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplL PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 349 FDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 FDL L G G + K+KVIK VR TGLGLKE+KELV+ P LK G+ K+EA+++ AKL+EVGA V ++ Sbjct: 57 FDLVLAGAG-DQKIKVIKVVREITGLGLKEAKELVDNTPKPLKEGIAKEEAEELKAKLEEVGASVEVK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_PROMA (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12 Identity = 42/139 (30.22%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 136 SEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 S+K I+D + LSL+E +L + G+ + V+M G + FD+ LE + A AK+KV+KEVR TGLGL ++K +VE P +K G +K++A+ + ++ VG +V+++ Sbjct: 2 SKKTDEILDSLKSLSLLEASELVKQIEEAFGVSAAASAGVVMAAPGAATGGGEAAAEEKTE----------FDVVLESFDASAKIKVLKEVRNATGLGLGDAKAMVEAAPKTIKEGASKEDAEALKKAIEAVGGKVTLK 130
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_PROM1 (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain NATL1A) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12 Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 1 Query: 136 SEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 S K I+D + LSL+E +L + G+ + V+M G + F++ LE + A +K+KV+KEVR TGLGL E+K LVE P +K G TK++A+ + ++ VG +V+++ Sbjct: 2 SAKTDEILDSLKSLSLLEASELVKQIEEAFGVSAAASAGVVMAAPGAAAGGDGADAAEEKTE---------FEVVLESFDASSKIKVLKEVRNATGLGLGEAKALVEAAPKTIKEGATKEDAEALKKAIEAVGGKVTLK 131
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_PELPB (50S ribosomal protein L7/L12 OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12 Identity = 46/136 (33.82%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 + ++V+EI L+L E +L + K G+ P V + G+ + FD+ L G E+K+ VIK VR TGLGLKE+K+LV+ P +K ++KDEA+KI +LK+ GA V ++ Sbjct: 3 IETLVEEIGKLTLTEASELVKALEEKFGVSAAP---VAVAGVAAAAAGDAPVVEEQTE----------FDVVLTAAG-ESKINVIKAVRAITGLGLKEAKDLVDGAPKTVKEAISKDEAEKIAKELKDAGASVEVK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_METCA (50S ribosomal protein L7/L12 OS=Methylococcus capsulatus GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12 Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ IS ++++E++DL + K G+ + V G + FD+ + +GA K+ VIK +R TGLGLKE+K+LVE VP+ +K G++K EAD I KL+E GA V ++ Sbjct: 8 ILETISNMTVMEIVDLISAMEEKFGVSAAAAVAVAPVAAGAAAPAVEEKTE--------------FDVVMTSFGAN-KVNVIKAIREITGLGLKEAKDLVEGVPSTVKEGISKAEADDIKKKLEEAGAAVDVK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_ENT38 (50S ribosomal protein L7/L12 OS=Enterobacter sp. (strain 638) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12 Identity = 44/133 (33.08%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ ++ +S+++V++L + K G+ + V FD+ L+G GA K+ VIK VRG TGLGLKE+K+LVE P LK GV+KD+A+ + L+E GA+V ++ Sbjct: 8 IIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAA------------------GPAEAAEEKTEFDVILKGIGAN-KVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKSLEEAGAEVEVK 121
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_ALHEH (50S ribosomal protein L7/L12 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12 Identity = 45/133 (33.83%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ IS ++++EV++L + + K G+ + G FD+ L +G+ K+ VIK VRG TGLGLKE+KE+VE P+ +K G +K+EA++I AKL+E GA V ++ Sbjct: 8 ILETISNMTVMEVVELIEEMEEKFGVTAAAAVAAAPAAAG--------------GEAEAAEEQTEFDVVLSSFGSN-KVAVIKAVRGITGLGLKEAKEVVEGAPSPIKEGASKEEAEEIKAKLEEAGASVEVK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RK12_NICSY (50S ribosomal protein L12, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12 Identity = 48/143 (33.57%), Postives = 71/143 (49.65%), Query Frame = 1 Query: 130 EPSEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEM---PNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSM 549 E EKV + DEIS L+L + L + +++KLG+ P V PG FD+ ++ + A++ IK VR T L LKE+KEL+E +P K GV+KDEA+ +L+E GA+VS+ Sbjct: 56 EAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVVAAPGAAAEAPAVVEEKTE-------------FDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEDAKKQLEEAGAKVSI 185
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_SYNS9 (50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain CC9902) GN=rplL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 44/139 (31.65%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 136 SEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 S K I++ + LSL+E +L + G+ + V+M G + FD+ LE + A AK+KV+K VR TGLGL ++K LVE P L+K G +KD+A+ + ++EVG +V+++ Sbjct: 2 SAKTDEILESLKSLSLLEASELVKQIEEAFGVSAAASAGVVMAAPGAAGGGEAAEEKTE------------FDVILESFEASAKIKVLKAVREATGLGLGDAKALVEAAPKLVKEGASKDDAEALKKAIEEVGGKVTIK 128 The following BLAST results are available for this feature:
BLAST of FC924986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924986 ID=FC924986; Name=FC924986; organism=Citrus clementina; type=EST; length=757bpback to top |