FC924986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_SYNS3 (50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain CC9311) GN=rplL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 136 SEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 S K I++ + LSL+E +L + + G+ + V+M G + FD+ LE + A AK+KV+K VR TGLGL ++K +VE P +K GV+KD+A+ + ++EVG +V+++ Sbjct: 2 SAKTDEILESLKSLSLLEASELVKQIEDAFGVSAAASAGVVMAAPGAAGGGDAAEEKTE------------FDVVLESFDAAAKIKVLKAVREATGLGLGDAKAMVEAAPKAIKEGVSKDDAEALKKAIEEVGGKVTIK 128
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_PROMT (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain NATL2A) GN=rplL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 1 Query: 136 SEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 S K I+D + LSL+E +L + G+ + V+M G + F++ LE + A +K+KV+KEVR TGLGL E+K LVE P +K G TK++A+ + ++ VG +V+++ Sbjct: 2 SAKTDEILDSLKSLSLLEASELVKQIEEAFGVSAAASAGVVMAAPGAAAGGDGADAAEEKTE---------FEVVLESFEASSKIKVLKEVRNATGLGLGEAKALVEAAPKTIKEGATKEDAEALKKAIEAVGGKVTLK 131
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_LISMO (50S ribosomal protein L7/L12 OS=Listeria monocytogenes GN=rplL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 46/136 (33.82%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 + I+ + S++E+ DL + + G+ + V G + F ++L G ++K+KVIK VR TGLGLKE+KELV+ P LK G+ KDEA++I AKL+EVGA V ++ Sbjct: 5 IEEIIASVKEASVLELNDLVKAIEEEFGVTAAAPVAVAAAGGAAAEQTE-------------------FTVELASAG-DSKIKVIKVVREITGLGLKEAKELVDNAPKALKEGIAKDEAEEIKAKLEEVGANVEVK 120
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_GLOVI (50S ribosomal protein L7/L12 OS=Gloeobacter violaceus GN=rplL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 48/142 (33.80%), Postives = 73/142 (51.41%), Query Frame = 1 Query: 136 SEKVASIVDEISCLSLVEVMDLADVVRNKLGIK-EMP--NMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 SE+V I++++ LSL+E +L + G+K E P ++MPG+ F + LE A+ K+ ++K R TGLGLKE+K+LVE P +K GV KD+A I KL+E GA+ S++ Sbjct: 3 SERVEKILEDLKALSLLEAAELVKGIEEVFGVKAEAPAGGGMMVMPGV-------MPGAPAAAAPAEPVEEQTEFTVMLEEVPADKKIAILKVAREITGLGLKEAKDLVEAAPKAVKEGVNKDDAATIKKKLEEAGAKASIK 137
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_DESAH (50S ribosomal protein L7/L12 OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=rplL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +V+ I+ +S++E+ +L + K G+ + +M G FD+ LE G + K+ VIKEVR TGLGLKE+K LV++ P +K G+ K+EA+KI A+L+ GAQVS++ Sbjct: 9 VVEFIANMSVLELSELVKELEEKFGVSAAAPVAMMAAG-------------GAADAGAAAEEQTEFDVILEAAG-DKKIGVIKEVRAITGLGLKEAKALVDEAPKPVKEGIVKEEAEKIKAQLEAAGAQVSVK 127
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_COPPD (50S ribosomal protein L7/L12 OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=rplL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 46/136 (33.82%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 + I+ EI +S+ ++ +L + K G+ + V P G FD+ L+ GA+ KL+VIK VR TGLGLKE+K+LVE P +K GVTK+EA+++ KL+E GA + ++ Sbjct: 3 IEEIISEIENMSVSQLAELVKALEEKFGVSASMPVAVAAPVAG------------PAAAAPAEEEKTSFDVILKEAGAK-KLEVIKVVREITGLGLKEAKDLVESAPKPIKEGVTKEEAEELKKKLEEAGAVIELQ 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_CHLTE (50S ribosomal protein L7/L12 OS=Chlorobium tepidum GN=rplL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSM 549 + ++V+EI L+L E +L + K G+ P +M G + FD+ L+ GA K+ VIK VR TGLGLKE+K++V+ P +K V+KDEA+KI +LK+ GA+V + Sbjct: 4 IETLVEEIGKLTLTEASELVKALEEKFGVSAAP---AVMAGAVMAAPAGEAAAAEEKTE---------FDVVLKSAGAN-KINVIKVVRAITGLGLKEAKDMVDGAPKTVKEAVSKDEAEKIAKELKDAGAEVEL 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_SALAR (50S ribosomal protein L7/L12 OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=rplL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12 Identity = 44/133 (33.08%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ ++ +S+++V++L + K G+ + V G FD+ L+ GA K+ VIK VRG TGLGLKE+K+LVE P LK GV+KD+A+ + L+E GA+V ++ Sbjct: 8 IIEAVAAMSVMDVVELITAMEEKFGVSAAAAVAVAGAGAAAEAAEEKTE----------------FDVILKAAGAN-KVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKSLEEAGAEVEVK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_PROMM (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12 Identity = 42/139 (30.22%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 136 SEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 S+K I+D + LSL+E +L + + G+ + V++ G + FD+ LE + A AK+KV+K VR TGLGL ++K +VE P +K G+ K++A+ + ++EVG +VS++ Sbjct: 2 SKKTDDILDSLKTLSLLEASELVKQIEDAFGVSAAASAGVVVAAGGAAGGGAAAEAAEEQTE---------FDVVLESFDASAKIKVLKAVREATGLGLGDAKAMVEAAPKTIKEGIAKNDAEALKKAIEEVGGKVSLK 131
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_PARL1 (50S ribosomal protein L7/L12 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12 Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G FD+ L G + K++VIKEVR TGLGLKE+K+LVE P +K +KDEA KI A+L++ GA+V ++ Sbjct: 4 LAKIVEDLSNLTVLEAAELSKMLEEKWGVSAAAPVAVAAAGAA---------------PAAAAEEQTEFDVILAAAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKTVKEAASKDEAAKIKAQLEKAGAKVELK 123 The following BLAST results are available for this feature:
BLAST of FC924986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924986 ID=FC924986; Name=FC924986; organism=Citrus clementina; type=EST; length=757bpback to top |