FC924986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RK12_SPIOL (50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea GN=RPL12 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12 Identity = 47/143 (32.87%), Postives = 73/143 (51.05%), Query Frame = 1 Query: 130 EPSEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEM---PNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSM 549 E EK+ + ++S L+L E L D +++KLG+ P V PG FD+ ++ + A++ VIK VR T LGLKE+KEL+E +P LK GV+KD+A+ +L++ GA+VS+ Sbjct: 59 EAPEKIEQLGTQLSGLTLEEARVLVDWLQDKLGVSAASFAPAAAVAAPGA-------------PADAAPAVEEKTEFDVSIDEVPSNARISVIKAVRALTSLGLKEAKELIEGLPKKLKEGVSKDDAEDAKKQLEDAGAKVSI 188
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_NITOC (50S ribosomal protein L7/L12 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=rplL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 42/133 (31.58%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ IS +++++V++L + + K G+ + P G FD+ L +G+ K++VIK VR T LGLKE+K+LVE P+ +K G++KDEAD+I +L+E GA + ++ Sbjct: 8 ILETISNMTVMDVVELIEAMEEKFGVSAAAPIAAAAPAAGAEAGAAAEEKTE-------------FDVVLVSFGSN-KVQVIKAVRSITSLGLKEAKDLVEGAPSPVKEGISKDEADEIKKQLEEAGASIEVK 126
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_METPB (50S ribosomal protein L7/L12 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rplL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +LA ++ K G+ + V G F + L G + K++VIKEVR TGLGLKE+K+LVE P +K V KDEA+K+ A+L++ GA+V ++ Sbjct: 4 LAKIVEDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAAGPAG------------GGAAAPAAEEQTEFTVVLASAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKESVAKDEAEKLKAQLEKAGAKVELK 126
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_HALHL (50S ribosomal protein L7/L12 OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=rplL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ I+ +S++EV++L + + K G+ + G FD+ L +G + K+ VIK VRG TGLGLKE+KE+VE P +K G +K+EAD I AKL+E GA V ++ Sbjct: 8 ILESIANMSVMEVVELIEAMEEKFGVTAAAAVAAAPAAGG-----------GGGDEGGAAEEQTEFDVILSSHG-DNKVGVIKAVRGVTGLGLKEAKEVVEGCPAPIKEGASKEEADDIKAKLEEAGASVELK 128
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_DESOH (50S ribosomal protein L7/L12 OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=rplL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 ++D I+ ++++E+ +L + K G+ + +M GM FD+ L G + K++VIKEVR TGLGLKE+K LVE+ P +K GV KDEA+K+ A+L+ GAQV ++ Sbjct: 9 VIDFIANMTVLELSELITELEEKFGVSAAAPVAMMAGGM------------PAGGDAGAAEEKTEFDVVLLTSG-DKKIQVIKEVRAITGLGLKEAKALVEEAPKPVKEGVPKDEAEKLKAQLEGAGAQVEIK 128
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BARQU (50S ribosomal protein L7/L12 OS=Bartonella quintana GN=rplL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+L+E +L+ ++ K G+ + V + FD+ L GA+ K+ VIKEVR TGLGLKE+K+LVE P +K G +KDEA+KI ++L+ GA+V + Sbjct: 4 LAKIVEDLSNLTLLEAAELSKLLEEKWGVSAAAPVAVATVAGAAAPAAEEKTE---------------FDVILVDCGAQ-KINVIKEVRALTGLGLKEAKDLVEGAPKPIKEGASKDEAEKIKSQLEAAGAKVEFK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RK12_TOBAC (50S ribosomal protein L12, chloroplastic OS=Nicotiana tabacum GN=RPL12 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 45/140 (32.14%), Postives = 69/140 (49.29%), Query Frame = 1 Query: 130 EPSEKVASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSM 549 E EKV + DEIS L+L + L + +++KLG+ F+ FD+ ++ + A++ IK VR T L LKE+KEL+E +P K GV+KDEA+ +L+E GA+VS+ Sbjct: 56 EAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVT----------AASFAPAAVAAAPGAAAEAPAVVEEKTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEDAKKQLEEAGAKVSI 185
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_YERPG (50S ribosomal protein L7/L12 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=rplL PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12 Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ ++ LS++E+++L + K G+ + FD+ L +G E K+ VIK VRG TGLGLKE+K+LVE P +LK GV KDEA+ + L+E GA V ++ Sbjct: 9 ILEGVAALSVMEIVELISAMEEKFGVS----------AAAVAAGPAAAVAAGPAAAVEAAEEQTEFDVVLASFG-ENKVAVIKAVRGATGLGLKEAKDLVESAPAVLKEGVNKDEAETLKKSLEEAGASVEIK 130
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_SALTY (50S ribosomal protein L7/L12 OS=Salmonella typhimurium GN=rplL PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12 Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ +S +S+++V++L + K G+ + V FD+ L+ GA K+ VIK VRG TGLGLKE+K+LVE P LK GV+KD+A+ + L+E GA+V ++ Sbjct: 8 IIEAVSAMSVMDVVELISAMEEKFGVSAAAAVAVAA------------------GPAEAAEEKTEFDVILKAAGAN-KVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKSLEEAGAEVEVK 121
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_SALTI (50S ribosomal protein L7/L12 OS=Salmonella typhi GN=rplL PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12 Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ +S +S+++V++L + K G+ + V FD+ L+ GA K+ VIK VRG TGLGLKE+K+LVE P LK GV+KD+A+ + L+E GA+V ++ Sbjct: 8 IIEAVSAMSVMDVVELISAMEEKFGVSAAAAVAVAA------------------GPAEAAEEKTEFDVILKAAGAN-KVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKSLEEAGAEVEVK 121 The following BLAST results are available for this feature:
BLAST of FC924986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924986 ID=FC924986; Name=FC924986; organism=Citrus clementina; type=EST; length=757bpback to top |