FC924987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924987 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.958e-36 Identity = 78/203 (38.42%), Postives = 118/203 (58.13%), Query Frame = 2 Query: 137 FHQDFDITWGDGRANILNNGQLLTLSLDKASGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTW----DEIDFEFLGNLSGDPYTLHTNVFTNGKGDK--EQQFHLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADAC 727 F + +G+G + + + L LDK +GSGF S + Y G +KL +AG V A+Y S G + DE+D EFLGNL G P+ TN++ NG ++ E+++ LWFDP+ +FH YSILW P +I+F VD PIRE E + +P+ +PM +Y+++W+A WAT GG D+T +PF + +++ D C Sbjct: 40 FDEGLSHLFGEGNLIRSPDDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYT-SNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQ-KPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFKDIALDGC 240
BLAST of FC924987 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.513e-32 Identity = 78/198 (39.39%), Postives = 118/198 (59.60%), Query Frame = 2 Query: 134 NFHQDFDITWGDGRANILNNGQLLTLSLDKASGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDKEQQFHLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADAC 727 N++Q TWG +A ++N L L+LDK SGSGF+S+ Y G ++++K S G +T++YL S S DE+ F+ LG +G PY L+TN++ G+G K+Q+F LWFDPT D+H+YS LWNP ++VF VD TPIR + S++ V +P Q M + S+ N G ++ D P+ A ++ + C Sbjct: 27 NYYQ----TWGH-QALVINKTSELQLTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRSSRHDELCFQILGK-NGPPYLLNTNMYLYGEGGKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVY--SKNPDVYYPSVQTMFLMGSVQN-------GSII--DPKQMPYIAKFQASKIEGC 207
BLAST of FC924987 vs. ExPASy Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.319e-16 Identity = 59/178 (33.15%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 143 QDFDITWGDGRANILNNGQLLTLSLDKASGSGF-----QSKNEYLFGKIDMQLKLVPGNSAGTVTAYYL---KSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDKEQQFHLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWN---ADDW 643 Q F+ TW N N+G+L LSL + + F +S N Y +G ++ +K P + G V++++ S G+ WDEID EFLG D + N +TNG G E+ +L FD + FHTY+ W P I + VDG K++ + + + P +I +LWN D W Sbjct: 52 QMFNCTWRANNVNFTNDGKL-KLSLTSPANNKFDCGEYRSTNNYGYGLYEVSMK--PAKNTGIVSSFFTYTGPSHGTQWDEIDIEFLGK---DTTKVQFNYYTNGVGGHEKIINLGFDASTSFHTYAFDWQPGYIKWYVDGV----LKHTATTNI---PSTPGKIMMNLWNGTGVDSW 216
BLAST of FC924987 vs. ExPASy Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 5.014e-16 Identity = 58/175 (33.14%), Postives = 89/175 (50.86%), Query Frame = 2 Query: 149 FDITWGDGRANILNNGQL---LTLSL-DKASGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYL---KSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDKEQQFHLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWN---ADDW 643 F+ TW N N+G+L LT S +K + ++S N Y +G ++ +K P + G V++++ + G+ WDEID EFLG D + N +TNG G E+ L FD + FHTY+ W P I + VDG K++ + + + P +I +LWN DDW Sbjct: 53 FNCTWRANNVNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMK--PAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGK---DTTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV----LKHTATANI---PSTPGKIMMNLWNGTGVDDW 215
BLAST of FC924987 vs. ExPASy Swiss-Prot
Match: CRR1_YEAST (Probable glycosidase CRR1 OS=Saccharomyces cerevisiae GN=CRR1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.905e-15 Identity = 66/208 (31.73%), Postives = 101/208 (48.56%), Query Frame = 2 Query: 143 QDFDITWGDGRANILNNGQLLTLSLDKASGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGD--KEQQFHLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSE-----SIGVAFPKNQPMRIYSSLW---------NADDWATRGGLVKTDWTHAPFTASYRNFNA 718 +DFD T + ++G ++ K +GS S +L+GK +++K S G VTA+ L S + DEIDFE+LG GD T +N ++ G D + Q+F + D A +HTY I W+P RI++ VDG R + S +P+ PMR+ ++W +WA GGL+ DW ++P F A Sbjct: 149 EDFDFTHSGYTSIEASSGNIVLAMPKKTTGSLITSTRSFLYGKASVRMKTA--RSRGVVTAFDLTS--AIGDEIDFEWLG---GDLMTAQSNYYSQGHLDYTRMQRFPVGADTWATYHTYEIDWDPDRIIWYVDGKIARTVLKKDTWDPISKEYRYPQT-PMRLEIAVWPGGSETNGPGTINWA--GGLI--DWENSPDIIEKGQFTA 344
BLAST of FC924987 vs. ExPASy Swiss-Prot
Match: GUB_ORPSP (Beta-glucanase OS=Orpinomyces sp. (strain PC-2) GN=licA PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.593e-14 Identity = 56/176 (31.82%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 149 FDITWGDGRANILNNGQLLTLSLDKASGSGF-----QSKNEYLFGKIDMQLKLVPGNSAGTVTAYYL---KSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDKEQQFHLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWN---ADDW 643 F+ W N LT+ D GSG+ ++KN Y +G + +K P + G V++++ S G+ WDEID EFLG D + N +TNG+G E +L FD + FHTY W I + VDGT + + ++I + P +I + WN DDW Sbjct: 61 FNCRWTPNNDKFENGKLKLTIDRD---GSGYTCGEYRTKNYYGYGMFQVNMK--PIKNPGVVSSFFTYTGPSDGTKWDEIDIEFLGY---DTTKVQFNYYTNGQGHHEHIHYLGFDASQGFHTYGFFWARNSITWYVDGTAV--YTAYDNI-----PDTPGKIMMNAWNGIGVDDW 221
BLAST of FC924987 vs. ExPASy Swiss-Prot
Match: GUB_CLOTH (Beta-glucanase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=licB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.045e-13 Identity = 51/177 (28.81%), Postives = 81/177 (45.76%), Query Frame = 2 Query: 149 FDITWGDGRANILNNGQLLTLSLDKASGSGFQS---KNEYLFGKIDMQLKLVPGNSAGTVTAYYL---KSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDKEQQFHLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLW---NADDWATR 652 F+ W + N +LTL + ++S + + FG ++++ + G V++++ S + WDEID EFLG D + N + NG G E +L FD + DFHTY W P I F VDG + ++ + +I V P +I +LW D+W R Sbjct: 60 FNCVWKPSQVTFSNGKMILTLDREYGGSYPYKSGEYRTKSFFGYGYYEVRMKAAKNVGIVSSFFTYTGPSDNNPWDEIDIEFLGK---DTTKVQFNWYKNGVGGNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVDGKKV--YRGTRNIPVT-----PGKIMMNLWPGIGVDEWLGR 226
BLAST of FC924987 vs. ExPASy Swiss-Prot
Match: GUB_BACLI (Beta-glucanase OS=Bacillus licheniformis GN=bg1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.783e-13 Identity = 53/176 (30.11%), Postives = 88/176 (50.00%), Query Frame = 2 Query: 149 FDITWGDGRANILNNGQLLTLSLDKASGSGF-----QSKNEYLFGKIDMQLKLVPGNSAGTVTAYYL---KSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDKEQQFHLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWN---ADDW 643 F+ TW ++ + G++ LSL S + F +S Y +G ++ +K P + G V++++ + G+ WDEID EFLG D + N +TNG G+ E+ +L FD +HTY+ W P I + VDG + K++ + + P +I +LWN D+W Sbjct: 59 FNCTWRANNVSMTSLGEM-RLSLTSPSYNKFDCGENRSVQTYGYGLYEVNMK--PAKNVGIVSSFFTYTGPTDGTPWDEIDIEFLGK---DTTKVQFNYYTNGVGNHEKIVNLGFDAANSYHTYAFDWQPNSIKWYVDG----QLKHTATTQI---PQTPGKIMMNLWNGAGVDEW 221
BLAST of FC924987 vs. ExPASy Swiss-Prot
Match: GUB_BACAM (Beta-glucanase OS=Bacillus amyloliquefaciens GN=bglA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.188e-13 Identity = 53/176 (30.11%), Postives = 88/176 (50.00%), Query Frame = 2 Query: 149 FDITWGDGRANILNNGQLLTLSLDKASGSGF-----QSKNEYLFGKIDMQLKLVPGNSAGTVTAYYL---KSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDKEQQFHLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWN---ADDW 643 F+ TW ++ + G++ L+L S + F +S Y +G ++++K P + G V++++ + G+ WDEID EFLG D + N +TNG G+ E+ L FD +HTY+ W P I + VDG + K++ + + P +I +LWN DDW Sbjct: 55 FNCTWRANNVSMTSLGEM-RLALTSPSYNKFDCGENRSVQTYGYGLYEVRMK--PAKNTGIVSSFFTYTGPTEGTPWDEIDIEFLGK---DTTKVQFNYYTNGAGNHEKFADLGFDAANAYHTYAFDWQPNSIKWYVDG----QLKHTATTQI---PAAPGKIMMNLWNGTGVDDW 217
BLAST of FC924987 vs. ExPASy Swiss-Prot
Match: GUB_CLOTM (Beta-glucanase OS=Clostridium thermocellum GN=licB PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.156e-12 Identity = 50/177 (28.25%), Postives = 80/177 (45.20%), Query Frame = 2 Query: 149 FDITWGDGRANILNNGQLLTLSLDKASGSGFQS---KNEYLFGKIDMQLKLVPGNSAGTVTAYYL---KSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDKEQQFHLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLW---NADDWATR 652 F+ W + N +LTL + ++S +++ FG ++++ + G V++++ S + WDEID EFLG D N + N G E +L FD + DFHTY W P I F VDG + ++ + +I V P +I +LW D+W R Sbjct: 60 FNCVWKPSQVTFSNGKMILTLDREYGGSYPYKSGEYRSKSFFGYGYYEVRMKAAKNVGIVSSFFTYTGPSDNNPWDEIDIEFLGK---DTTKAQFNWYKNEVGGNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVDGKKV--YRGTRNIPVT-----PGKIMMNLWPGKGVDEWLGR 226 The following BLAST results are available for this feature:
BLAST of FC924987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924987 ID=FC924987; Name=FC924987; organism=Citrus clementina; type=EST; length=813bpback to top |