FC924990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924990 vs. ExPASy Swiss-Prot
Match: LAC14_ARATH (Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.608e-11 Identity = 50/181 (27.62%), Postives = 78/181 (43.09%), Query Frame = 3 Query: 120 ATLNGISFVKPETPIRLADKYNVKGAYKLDFPNTPLTR----------PPRTDRSLINATYKGFIEIILQNND---TKMQSFHMDGYSFFVVGMDFGIW-TESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWNL--RVENLDRWYLGQETYMKIVNPEENGDTEMGPPDNVLYC 614 +++N ISFV P I A ++ G ++ DFP P T+ P R ++ Y +E+ILQ + + H+ GY+F+VVG FG + + YN D + T V WTA+ +N GVW L +E W G T + + + PP ++ C Sbjct: 391 SSINNISFVNPSVDILRAYYRHIGGVFQEDFPRNPPTKFNYTGENLPFPTRFGTKVVVLDYNSSVELILQGTTVWASNIHPIHLHGYNFYVVGSGFGNFDRRKDPLRYNLVDPPEETTVGVPRNGWTAVRFVANNPGVWLLHCHIERHATW--GMNTVFIVKDGPTKSSRMVKPPPDLPSC 569
BLAST of FC924990 vs. ExPASy Swiss-Prot
Match: LAC16_ARATH (Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 43/142 (30.28%), Postives = 65/142 (45.77%), Query Frame = 3 Query: 120 ATLNGISFVKPETPIRLADKYNVKGAYKLDFPNTP-----LTRPPRTD--------RSLINATYKGFIEIILQNNDTKMQS---FHMDGYSFFVVGMDFGIWT-ESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVW 494 A +N ++F P+T + A +N+ G + DFP P T P + L Y ++I+LQN + FH+ G++FF VG G + E + ++N D + + T V G WTAI DN GVW Sbjct: 385 AGINNVTFTMPKTALLQAHFFNISGVFTDDFPAKPSNPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQIVLQNTAMILSDNHPFHLHGFNFFEVGRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGGWTAIRFIADNPGVW 526
BLAST of FC924990 vs. ExPASy Swiss-Prot
Match: LAC1_ARATH (Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 55/187 (29.41%), Postives = 81/187 (43.32%), Query Frame = 3 Query: 120 ATLNGISFVKPETPIRLADKY---NVKGAYKLDFPNTPLTRPPRTD-------------RSLINATYKGFIEIILQNN---DTKMQSFHMDGYSFFVVGMDFGIWT-ESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVW--NLRVENLDRWYLGQETYMKIVNPEENGDTEMGPPDNVLYC 614 A++N ISFV+P PI + + Y KG + LDFP P R T L + +EI+ Q + + H+ G++FFVVG FG + E + YN D + T V G W AI ++ DN GVW + +E W L +K + T + PP ++ C Sbjct: 399 ASMNNISFVRP--PISILESYYKKQSKGVFSLDFPEKPPNRFDFTGVDPVSENMNTEFGTKLFEVEFGSRLEIVFQGTSFLNIENHPLHVHGHNFFVVGRGFGNFDPEKDPKRYNLVDPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGFIVK--DGPLPSQTLLPPPHDLPQC 581
BLAST of FC924990 vs. ExPASy Swiss-Prot
Match: LAC15_ARATH (Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 60/207 (28.99%), Postives = 86/207 (41.55%), Query Frame = 3 Query: 78 LRSLPPVTIDG----KVRATLNGISFVKPE-TPIRLADKYNVKGAYKLDFPNTP-------------LTRPPRTDRSLINATYKGFIEIILQNNDTKM----QSFHMDGYSFFVVGMDFG---IWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWNLRVENLDR---WYLGQETYMKIVNPEENGDTEMGPPDNVLYC 614 LR P + +G ++ A++N ISFV P I A Y++KG Y FP P PR + + +E+++Q H+ G+SF+VVG+ FG I E + YN +D K T V W AI DN GVW + +LDR W G + N E + PPD++ C Sbjct: 360 LRMCPQNSCEGPNGSRLAASMNNISFVTPSHVDILKAYYYHIKGVYGTRFPEFPPLIFNFTAENQPLFLETPRLATEVKVIEFGQVVELVIQGTSLVGGGLDHPMHLHGFSFYVVGVGFGNYNISEEDPSSRYNLYDPPYKNTMTVPRNGWIAIRFVADNPGVWFMHC-HLDRHQTW--GMNVVFIVKNGREPNQQILPPPDDLPPC 563 The following BLAST results are available for this feature:
BLAST of FC924990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924990 ID=FC924990; Name=FC924990; organism=Citrus clementina; type=EST; length=774bpback to top |