FC924991
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.105e-26 Identity = 66/187 (35.29%), Postives = 115/187 (61.50%), Query Frame = 3 Query: 288 STQVKAFVTIKPSVGGLVSGFVDDVKDMF----GKSLLLELVSAELDPKTGAEKPTIK----GFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 S V A V I+ + ++ + ++F G+ +L++LVS E+DP+TG + +++ G + + ++++ + F VP +FG+ GAILV N E+ L++I+++ + + +W+ SK+ N Q RI F ++ LPS+TP+G+ LR ++L+++RGDG+GERK +RIYDYDVYND Sbjct: 79 SKTVTAVVKIRKKIKEKLTERFEHQLELFMKAIGQGMLIQLVSEEIDPETGKGRKSLESPVMGLPKAVKDPR--YLVFTADFTVPINFGKPGAILVTNLLSTEICLSEIIIEDSTD-TILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKELREKDLVSVRGDGKGERKPHERIYDYDVYND 262
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.884e-26 Identity = 72/181 (39.78%), Postives = 94/181 (51.93%), Query Frame = 3 Query: 318 KPSVGGL-------VSGFVDDVKDMFGKSLLLELVSAELDPKTGAEK----PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 K +VGGL V +D++ G+S+ L+L+SA G K ++G G + +FE S G GA ++N E YL + L D P G + C SWV + + K RIFF N +Y+PS+TP L R EEL NLRGDG+GERK DRIYDYDVYND Sbjct: 41 KGNVGGLIGTGLNVVGSTLDNLTAFLGRSVALQLISATKPLANGKGKVGKDTFLEGIIVSLPTLGAGESAFNIQFEWDESMGIPGAFYIKNYMQVEFYLKSLTLEDVPNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAALVGYREEELKNLRGDGKGERKEHDRIYDYDVYND 221
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.221e-25 Identity = 67/171 (39.18%), Postives = 94/171 (54.97%), Query Frame = 3 Query: 336 LVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHR-------AGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 +V G VD +F +++ ++L+SA G K + F + G+ +D +Y FE +FG A ++N E +L + L D P +G ++ C SWV + K+ RIFF NK+YLP++TP L + R EEL NLRGDG GERK DRIYDY VYND Sbjct: 50 IVGGIVDGATAIFSRNIAIQLISATKTDGLGNGKVGKQTFLEKHLPSLPNLGDRQDAFNVY---FEWDENFGIPEAFYIKNFMQSEFFLVSLTLEDIPNHGTIHFVCNSWVYNAKSYKRDRIFFANKTYLPNETPASLVKYRKEELENLRGDGTGERKEYDRIYDYAVYND 217
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.595e-25 Identity = 65/168 (38.69%), Postives = 88/168 (52.38%), Query Frame = 3 Query: 336 LVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEK----PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 ++ +D + G+S+ L+L+SA G K ++G G + FE G GA ++N E +L + L D P +G + C SWV + + K RIFF NKSYLPS+TP+ L + R EEL LRGDG GERK +RIYDYDVYND Sbjct: 50 IIGSTLDGLTAFLGRSVSLQLISATKSDANGKGKVGKDTFLEGVLASLPTLGAGESAFNIHFEWDHEMGIPGAFYIKNYMQVEFFLKSLTLEDVPNHGTIRFVCNSWVYNSKLYKSPRIFFANKSYLPSETPSPLVKYREEELQTLRGDGTGERKLHERIYDYDVYND 217
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.554e-25 Identity = 76/205 (37.07%), Postives = 101/205 (49.27%), Query Frame = 3 Query: 276 FTQKSTQVKAFVTIKP----------SVGGLVS---GFVDDVKDMF---GKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDK-----DGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 F QK ++K + + SVGG+V GF+ D + ++L+SA K K I + G+ G Y+ FE FG GA ++N E YL ++L D P +G ++ C SWV + K RIFF N +YLPS+TP L + R EEL N+RGDG GERK DRIYDYDVYND Sbjct: 4 FGQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALTFAATKISIQLISAT---KADGGKGKIGKSTNLRGKITLPTLGAGEQAYDVNFEWDSDFGIPGAFYIKNFMQNEFYLKSLILEDIPNHGTIHFVCNSWVYNSKNYKTDRIFFANNTYLPSETPAPLLKYREEELKNVRGDGTGERKEWDRIYDYDVYND 205
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.641e-25 Identity = 70/179 (39.11%), Postives = 96/179 (53.63%), Query Frame = 3 Query: 324 SVGGLVS-GF------VDDVKDMFGKSLLLELVSAELDPKTGAEK----PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDG-PRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 +VGG++ GF VD++ G+S+ L+L+SA TG K ++G G ++ FE G GA ++N E +L + LD P +G + C SW+ + +K RIFF N++YLPS+TP L R EEL NLRGDG GERK +RIYDYDVYND Sbjct: 34 TVGGVIGQGFDILGSTVDNLTAFLGRSVSLQLISATKPDATGKGKLGKATFLEGIISSLPTLGAGQSAFKIHFEWDDDMGIPGAFYIKNFMQTEFFLVSLTLDDIPNHGSIYFVCNSWIYNAKHHKIDRIFFANQTYLPSETPAPLVHYREEELNNLRGDGTGERKEWERIYDYDVYND 212
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.008e-24 Identity = 67/179 (37.43%), Postives = 94/179 (52.51%), Query Frame = 3 Query: 324 SVGG-------LVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEK----PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 SVGG LV +D + G+ + L+L+SA G K ++G G ++ FE G +GA ++N E +L + L D P +G ++ C SW+ + + K RIFF N++YLPS+TP L + R EEL NLRGDG GERK +R+YDYDVYND Sbjct: 31 SVGGIIGQGLDLVGSTLDTLTAFLGRPVSLQLISATKADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGILGAFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNLRGDGTGERKEWERVYDYDVYND 209
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.143e-23 Identity = 67/171 (39.18%), Postives = 91/171 (53.22%), Query Frame = 3 Query: 336 LVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHR-------AGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 LV G +D G+++ ++L+SA +G K + + + G +D I+ FE SFG GA ++N E +L + L D P +G + C SWV + K+ RIFF N +YLPS TP L + R EEL LRGDG G+RK DRIYDYDVYND Sbjct: 50 LVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIF---FEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTYLPSATPAPLLKYRKEELEVLRGDGTGKRKDFDRIYDYDVYND 217
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.143e-23 Identity = 62/170 (36.47%), Postives = 88/170 (51.76%), Query Frame = 3 Query: 336 LVSGFVDDVKDMFGKSLLLELVSA-ELDPKTGAE-----KPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 L D + + G+ + +L+S+ + DP G + ++ F G + F+ FG GA +++N H E +L + L D P +G V+ C SWV K RIFF N+ YLPS+TP L + R EL+ LRGDG G+R+ DRIYDYDVYND Sbjct: 36 LAGSLTDKIFEALGQKVSFQLISSVQSDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDWNEEFGVPGAFVIKNMHINEFFLKSLTLEDVPNHGKVHFVCNSWVYPSFRYKSDRIFFANQPYLPSETPELLRKYRENELVTLRGDGTGKREAWDRIYDYDVYND 205
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.547e-23 Identity = 65/172 (37.79%), Postives = 86/172 (50.00%), Query Frame = 3 Query: 327 VGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPT----IKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVEN-EHHKEMYLNDIVLDG-PRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 VG + +D G+S+ L L+SA + +G K + ++G D + FE + G GA +EN E +L + LD P G + C SW+ + + RIFF NK+YLPS TP L R EEL LRGDG GER+ DRIYDYDVYND Sbjct: 46 VGSIAGSIIDTATAFLGRSVRLRLISATVADASGKGKVSKEAFLEGLLTSIPTLGDKQSAFSVHFEWDSNMGTPGAFYIENFMQGGEFFLVSLTLDDVPNVGSIKFACNSWIYNDKKYQSDRIFFANKTYLPSATPAPLVSYRQEELKTLRGDGTGERQEWDRIYDYDVYND 217 The following BLAST results are available for this feature:
BLAST of FC924991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924991 ID=FC924991; Name=FC924991; organism=Citrus clementina; type=EST; length=825bpback to top |