FC924991
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.673e-23 Identity = 61/170 (35.88%), Postives = 87/170 (51.18%), Query Frame = 3 Query: 342 SGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGED--------KDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 + F+D + + G + L LVS+++ K + AH ED G ++ F+ FG GA L+ N H E L + L D P +G V+ C SW+ R+FF+NK+YLP +TP L + R EEL++LRG G+GE K DR+YDY YND Sbjct: 40 ASFLDRLHEFLGNKITLRLVSSDVTDSENGSKGKLGKAAHL--EDWITTITSLTAGESAFKVTFDYETDFGYPGAFLIRNSHFSEFLLKSLTLEDVPGHGRVHYICNSWIYPAKHYTTDRVFFSNKTYLPHETPATLLKYREEELVSLRGTGEGELKEWDRVYDYAYYND 207
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.264e-22 Identity = 63/163 (38.65%), Postives = 85/163 (52.15%), Query Frame = 3 Query: 351 VDDVKDMFGKSLLLELVSAELDPKTGAEK----PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRN-GPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 VD++ G+S+ L+L+SA G K ++G G + FE S G GA ++N E +L + L+ N G + C SWV + + K RIFF N +Y+PS+TP L R EEL +LRG+G GERK DRIYDYDVYND Sbjct: 29 VDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.156e-22 Identity = 52/107 (48.60%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 507 FEVPPSFGEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 F+ FG GA +++N H E +L + L D P +G V+ C SWV K RIFF N+ YLPS+TP L + R ELL LRGDG G+R+ DRIYDYD+YND Sbjct: 100 FDWNEEFGVPGAFIIKNMHINEFFLKSLTLEDVPNHGKVHFVCNSWVYPSLNYKSDRIFFANQPYLPSETPELLRKYRENELLTLRGDGTGKREAWDRIYDYDIYND 206
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOXB_PHAVU (Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.816e-22 Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 3 Query: 537 GAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 GA ++N E YL + L D P +G ++ C SW+ + V K RIFF N +YLPS+TP L + R EEL N+RGDG GERK DR+YDYDVYND Sbjct: 3 GAFYIKNFMQVEFYLKSLTLEDIPNHGTIHFICNSWIYNSKVYKSDRIFFANNTYLPSETPAPLLKYREEELKNVRGDGSGERKEWDRVYDYDVYND 99
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.058e-21 Identity = 58/164 (35.37%), Postives = 84/164 (51.22%), Query Frame = 3 Query: 351 VDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVP-----PSFGEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 VD + D+ G+ + ++L+S ++ K + + D ES F V FG GA +++N H E +L + L D P G ++ C SWV K RIFF N++YLPS+TP L + R EL+ LRGDG G+ + DR+YDY YND Sbjct: 41 VDGISDLLGQKVSIQLISGSVNYDGLEGKLSNPAYLESWLTDITPITAGESTFSVTFDWDRDEFGVPGAFIIKNLHLNEFFLKSLTLEDVPNYGKIHFVCNSWVYPAFRYKSDRIFFANQAYLPSETPQPLRKYRENELVALRGDGTGKLEEWDRVYDYACYND 204
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.442e-20 Identity = 58/176 (32.95%), Postives = 91/176 (51.70%), Query Frame = 3 Query: 336 LVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHR---AGEDKDGHIIYESKFEVP----PSFGEVGAILVENEHHKEMYLNDIVLDGPRNGP-----VNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQ-GERKTQDRIYDYDVYND 824 +++ +D V ++ G+ + L L+S+ ++ + AH + K E+ F V S G A +++N HH + YL + L G +G ++ C SW+ H + R+FF+NK+YLPS+TP + LR EEL NLRG+ + GE K DR+YDY YND Sbjct: 52 VMASLLDRVNELLGRRVSLHLISSHQPDPANEKRGRLGKAAHLEKWVTKIKTSVTAEETAFGVTFDWDESMGPPAAFVIKNHHHSQFYLKSLTLRGFPDGEGGATAIHFICNSWIYPNHRYRSDRVFFSNKAYLPSETPELIKELREEELKNLRGNEKGGEFKEWDRVYDYAYYND 227
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.088e-17 Identity = 64/173 (36.99%), Postives = 83/173 (47.98%), Query Frame = 3 Query: 351 VDDVKDMFGKSLLLELVSAE-LDP------KTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVP-----PSFGEVGAILVENEHHKEMYLNDIVLDGP--RNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDG-QGERKTQDRIYDYDVYND 824 +D + + GK + +L+S+ +DP K GAE + G ES+F V G GAI+V+N H E +L I LD R G V SWV + R+FF N +YLPSQ P L R +EL NLRGD QG + DR+Y YDVYND Sbjct: 40 IDGLGEFLGKGVTCQLISSTAVDPNNGNRGKVGAEASLEQWLTSSLPSLTTG----ESRFGVTFDWDVDKLGVPGAIIVKNHHSNEFFLKTITLDDVPGRAGAVVFLANSWVYPADKYRYDRVFFANDAYLPSQMPAALKPYRDDELRNLRGDDQQGPYEEHDRVYRYDVYND 208
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.088e-17 Identity = 61/171 (35.67%), Postives = 86/171 (50.29%), Query Frame = 3 Query: 351 VDDVKDMFGKSLLLELVSAEL-DPKTG----------AEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDG-PRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDG-QGERKTQDRIYDYDVYND 824 +D + + G+ + +LVS+ L DP G E+ + GE K G + +E + E G GAI+V+N H E +L I LD P +G V SW+ + R+FF+N + LPS+ P L R +EL NLRGD QG + DR+Y YDVYND Sbjct: 39 IDGISEFLGRGVTCQLVSSSLVDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFG-VTFEWEVE---KMGIPGAIIVKNNHAAEFFLKTITLDNVPGHGAVVFVANSWIYPASKYRYNRVFFSNDTSLPSKMPAALKPYRDDELRNLRGDDQQGPYQEHDRVYRYDVYND 205
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.562e-17 Identity = 62/176 (35.23%), Postives = 85/176 (48.30%), Query Frame = 3 Query: 327 VGGLVSGFVDDVKDMFG--KSLLLELVSAEL-DPKTGAE----KPT-IKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDG-PRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQ-GERKTQDRIYDYDVYND 824 +G + +D V ++ G + + LVSA DP G KP ++ G ++ FE S G GA++V N + E +L + LDG P G V SW+ + +R+FF N +YLPS+ P L R EEL LRGDG+ G K DRIY YD YND Sbjct: 37 LGDFHASLLDGVHNILGHKEGVAFRLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFRVAFEWDESQGIPGAVVVTNSNRSEFFLKTLTLDGVPGKGTVVFVANSWIYPADNYQYERVFFANDTYLPSKMPAPLIPYRQEELNILRGDGKIGPYKEHDRIYRYDYYND 212
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.309e-16 Identity = 57/170 (33.53%), Postives = 83/170 (48.82%), Query Frame = 3 Query: 342 SGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSF-------GEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRG-DGQGERKTQDRIYDYDVYND 824 + +D+V ++FG S+ +LVSA + + + + A+ D + + + ++ F G GAI+++N H + +L I L D P + SW+ RIFF N SYLPSQ P L R +EL LRG D QG + DRIY YDVYND Sbjct: 36 ASLLDNVHEVFGNSITCQLVSATVADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIKNHHSTKFFLKTITLHDVPGCDTIVFVANSWIYPVGKYHYNRIFFANNSYLPSQMPEALRPYREDELRYLRGEDRQGPYQEHDRIYRYDVYND 205 The following BLAST results are available for this feature:
BLAST of FC924991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924991 ID=FC924991; Name=FC924991; organism=Citrus clementina; type=EST; length=825bpback to top |