FC924992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924992 vs. ExPASy Swiss-Prot
Match: TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.905e-19 Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 1 Query: 196 KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 354 K+P SKDRH+KV+GRGRRIRMP CAARVFQLTRELGHKSDG+TI WLL +AE Sbjct: 53 KRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAE 105
BLAST of FC924992 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSJ (Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.905e-19 Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 1 Query: 181 GALTVKKPP--SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 354 G V+KPP ++DRH+KV+GRGRRIRMP CAAR+FQLTRELGHKSDG+TI WLL+Q+E Sbjct: 64 GMAMVRKPPPRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSE 123
BLAST of FC924992 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSI (Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=4 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.905e-19 Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 1 Query: 181 GALTVKKPP--SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 354 G V+KPP ++DRH+KV+GRGRRIRMP CAAR+FQLTRELGHKSDG+TI WLL+Q+E Sbjct: 64 GMAMVRKPPPRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSE 123
BLAST of FC924992 vs. ExPASy Swiss-Prot
Match: PCF1_ORYSJ (Transcription factor PCF1 OS=Oryza sativa subsp. japonica GN=PCF1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.882e-18 Identity = 50/90 (55.56%), Postives = 60/90 (66.67%), Query Frame = 1 Query: 85 LPGAHMSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 354 + A +SDGAT P+R +P K P S DRHSKV GRGRR+R+P + AARVFQLTRELGH++DG+TIEWLLRQAE Sbjct: 32 IAAAEPPSSDGAT----------PRRVRPR-------KSPSSSDRHSKVAGRGRRVRIPAMVAARVFQLTRELGHRTDGETIEWLLRQAE 104
BLAST of FC924992 vs. ExPASy Swiss-Prot
Match: TCP6_ARATH (Transcription factor TCP6 OS=Arabidopsis thaliana GN=TCP6 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.420e-18 Identity = 38/53 (71.70%), Postives = 49/53 (92.45%), Query Frame = 1 Query: 196 KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 354 KK P+KDRH KV+GRGRR+R+P +CAAR++QLT+ELGHKSDG+T+EWLL+ AE Sbjct: 64 KKKPNKDRHLKVEGRGRRVRLPPLCAARIYQLTKELGHKSDGETLEWLLQHAE 116
BLAST of FC924992 vs. ExPASy Swiss-Prot
Match: TCP11_ARATH (Transcription factor TCP11 OS=Arabidopsis thaliana GN=TCP11 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 37/60 (61.67%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 175 GNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 354 G G ++ + +KDRH+KV+GR RR+ MP + AAR+FQLTRELGHK++G+TIEWLL QAE Sbjct: 35 GGGCISAR---TKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAE 91 The following BLAST results are available for this feature:
BLAST of FC924992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924992 ID=FC924992; Name=FC924992; organism=Citrus clementina; type=EST; length=663bpback to top |