FC924994

Overview
NameFC924994
Unique NameFC924994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.830e-52
Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = 2
Query:  134 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGW 487
            MAKSSFK EH LE+R AE+ARIREKYPDRIPVIVEKAEK+D+P IDKKKYLVPADL+VGQFVYV+RKRIKLSAEKAIF+FV N LPP GALMS++YEE KD+DGFLY+TYSGENTFG+
Sbjct:    1 MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118          
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.138e-47
Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = 2
Query:  143 SSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484
            SSFK EHP E+R AE+ RIR KYPDRIPVI EKA+++D+PDIDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+F+ N LPPT ALMS IYEE KD DGFLY+TYSGENTFG
Sbjct:    2 SSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115          
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.486e-47
Identity = 89/119 (74.79%), Postives = 107/119 (89.92%), Query Frame = 2
Query:  134 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWS 490
            M+  SF+ +H  E+R AE+ RIREKY DR+PVIVEK+EK+D+P+IDKKKYLVPADL+VGQFVYV+RKRI+LSAEKAIF+FV N LPPTGA+MS IY+ENK+EDGFLY+TYSGENTFG S
Sbjct:    1 MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGSS 119          
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.535e-47
Identity = 90/116 (77.59%), Postives = 105/116 (90.52%), Query Frame = 2
Query:  143 SSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWS 490
            S FK++   E+R AE+ RIREKYPDRIPVIVEKAEK++VP+IDKKKYLVP+DL+VGQFVYV+RKRIKLSAEKAIF+FV N LPPTG LMS++YE+ KDEDGFLY+TYSGENTFG S
Sbjct:    5 SIFKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGAS 120          
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8_LACBI (Autophagy-related protein 8 OS=Laccaria bicolor GN=ATG8 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 3.660e-46
Identity = 87/115 (75.65%), Postives = 102/115 (88.70%), Query Frame = 2
Query:  140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484
            +S FK EHP E+R AE+ RIR+KYPDRIPVI EKA++TD+P IDKKKYLVP+DL+VGQFVYV+RKRIKL+ EKAIF+FV   LPPT ALMSAIYEE+KDED FLY++YSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPPTAALMSAIYEEHKDEDNFLYVSYSGENTFG 116          
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8_YARLI (Autophagy-related protein 8 OS=Yarrowia lipolytica GN=ATG8 PE=3 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 4.780e-46
Identity = 87/115 (75.65%), Postives = 103/115 (89.57%), Query Frame = 2
Query:  140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484
            +S FK EHP E+R AE+ RIR+KY DR+PVI EK EK+D+P IDKKKYLVPADL+VGQFVYV+RKRIKLS+E+AIF+FV + LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRRAEAERIRKKYDDRVPVICEKVEKSDIPVIDKKKYLVPADLTVGQFVYVIRKRIKLSSERAIFIFVDDVLPPTAALMSSIYEEHKDEDGFLYVTYSGENTFG 116          
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8_MAGGR (Autophagy-related protein 8 OS=Magnaporthe grisea GN=ATG8 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.065e-45
Identity = 90/120 (75.00%), Postives = 104/120 (86.67%), Query Frame = 2
Query:  140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWSF*E 499
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV++TLPPT ALMS+IYE +KDEDGFLY+TYSGENTFG  F E
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYTDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVQDTLPPTAALMSSIYELHKDEDGFLYITYSGENTFGDLFEE 121          
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8_PODAN (Autophagy-related protein 8 OS=Podospora anserina GN=ATG8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.391e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = 2
Query:  140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8_PENCW (Autophagy-related protein 8 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.391e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = 2
Query:  140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8_NEUCR (Autophagy-related protein 8 OS=Neurospora crassa GN=atg-8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.391e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = 2
Query:  140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of FC924994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8F_ARATH5.830e-5283.05Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8_PHYIN1.138e-4778.95Autophagy-related protein 8 OS=Phytophthora infest... [more]
ATG8G_ARATH1.486e-4774.79Autophagy-related protein 8g OS=Arabidopsis thalia... [more]
ATG8E_ARATH2.535e-4777.59Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8_LACBI3.660e-4675.65Autophagy-related protein 8 OS=Laccaria bicolor GN... [more]
ATG8_YARLI4.780e-4675.65Autophagy-related protein 8 OS=Yarrowia lipolytica... [more]
ATG8_MAGGR1.065e-4575.00Autophagy-related protein 8 OS=Magnaporthe grisea ... [more]
ATG8_PODAN1.391e-4576.52Autophagy-related protein 8 OS=Podospora anserina ... [more]
ATG8_PENCW1.391e-4576.52Autophagy-related protein 8 OS=Penicillium chrysog... [more]
ATG8_NEUCR1.391e-4576.52Autophagy-related protein 8 OS=Neurospora crassa G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YA19FM1 TF Citrus clementina cDNA clone KN0AAP8YA19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924994 ID=FC924994; Name=FC924994; organism=Citrus clementina; type=EST; length=705bp
CAAAATAAATTCTCCTTAATCAACCGATCAATCAATCAATCAATCAAATA
CCTTGAAACCCTGCTAATTTCCTTCTCTTCTCCGATCCACTTCTCGTGTC
GTGTTGAAGAGTCATCGTAGCGTCAGTTTCGCCATGGCCAAAAGTTCATT
CAAGCTCGAGCATCCATTGGAGAGGAGGCTAGCAGAATCTGCTCGCATTA
GAGAGAAGTATCCTGATAGGATTCCGGTGATTGTGGAGAAGGCTGAGAAG
ACTGATGTTCCTGACATTGACAAGAAAAAATACCTTGTCCCAGCGGATTT
ATCTGTGGGACAATTTGTTTATGTTGTCCGTAAAAGGATTAAGCTCAGTG
CAGAAAAGGCCATATTTGTTTTTGTTAAGAATACTTTACCTCCAACCGGT
GCCTTGATGTCTGCTATATATGAGGAAAACAAGGATGAAGATGGTTTTCT
TTACATGACTTACAGTGGAGAGAATACCTTCGGTTGGTCATTTTAAGAGC
AAAGGCAACAAGCCATGTATCATAAAATTTGAAAGTTGTATATTCTCAGT
TGATCCCTTTTAAGCCATTCCCAGACATGTTCACTGATATCTTGTTTTTA
TTTTGGGTTGATTGCATCAGTTGATGATAGAAGTAACTCTTGTTAAAATT
GTCCGTTAGTGGTAGATATTGAATGGAGGAAACTAATTTACTAGTAATAC
TGATT
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