FC924994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: GBRL1_BOVIN (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Bos taurus GN=GABARAPL1 PE=3 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 8.458e-35 Identity = 67/115 (58.26%), Postives = 87/115 (75.65%), Query Frame = 2 Query: 140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484 K +K +HP E R E +IR+KYPDR+PVIVEKA K VPD+DK+KYLVP+DL+VGQF +++RKRI L E A+F FV NT+PPT A M +YE+N +ED FLY+ YS E+ +G Sbjct: 2 KFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: GBRAP_RAT (Gamma-aminobutyric acid receptor-associated protein OS=Rattus norvegicus GN=Gabarap PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.214e-34 Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 2 Query: 140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484 K +K EHP E+R +E +IR+KYPDR+PVIVEKA K + D+DKKKYLVP+DL+VGQF +++RKRI L AE A+F FV N +PPT A M +Y+E+ +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: GBRAP_RABIT (Gamma-aminobutyric acid receptor-associated protein OS=Oryctolagus cuniculus GN=GABARAP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.214e-34 Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 2 Query: 140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484 K +K EHP E+R +E +IR+KYPDR+PVIVEKA K + D+DKKKYLVP+DL+VGQF +++RKRI L AE A+F FV N +PPT A M +Y+E+ +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: GBRAP_MOUSE (Gamma-aminobutyric acid receptor-associated protein OS=Mus musculus GN=Gabarap PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.214e-34 Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 2 Query: 140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484 K +K EHP E+R +E +IR+KYPDR+PVIVEKA K + D+DKKKYLVP+DL+VGQF +++RKRI L AE A+F FV N +PPT A M +Y+E+ +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: GBRAP_HUMAN (Gamma-aminobutyric acid receptor-associated protein OS=Homo sapiens GN=GABARAP PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.214e-34 Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 2 Query: 140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484 K +K EHP E+R +E +IR+KYPDR+PVIVEKA K + D+DKKKYLVP+DL+VGQF +++RKRI L AE A+F FV N +PPT A M +Y+E+ +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: GBRAP_BOVIN (Gamma-aminobutyric acid receptor-associated protein OS=Bos taurus GN=GABARAP PE=3 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.214e-34 Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 2 Query: 140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484 K +K EHP E+R +E +IR+KYPDR+PVIVEKA K + D+DKKKYLVP+DL+VGQF +++RKRI L AE A+F FV N +PPT A M +Y+E+ +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8I_ARATH (Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.198e-34 Identity = 70/113 (61.95%), Postives = 86/113 (76.11%), Query Frame = 2 Query: 146 SFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484 SFK ++ L+ RLAES I KYP RIPVI EK KTD+P I+KKK+LVP D+SVGQF+Y++ R+ LS KA+FVFV NTLP T ALM ++YE KD+DGF+YM YS E TFG Sbjct: 3 SFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: GBRL3_HUMAN (Gamma-aminobutyric acid receptor-associated protein-like 3 OS=Homo sapiens GN=GABARAPL3 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32 Identity = 63/115 (54.78%), Postives = 84/115 (73.04%), Query Frame = 2 Query: 140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484 K +K HP E R E +IR+KYPDR+P+IVEKA K VPD+D++KYLVP+DL+ GQF ++RKRI L E A+F FV NT+PPT A M +YE++ +ED FLY+ YS E+ +G Sbjct: 2 KFQYKEVHPFEYRKKEGEKIRKKYPDRVPLIVEKAPKARVPDLDRRKYLVPSDLTDGQFYLLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDSHEEDDFLYVAYSNESVYG 116
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: LGG1_CAEEL (Protein lgg-1 OS=Caenorhabditis elegans GN=lgg-1 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.816e-30 Identity = 62/115 (53.91%), Postives = 86/115 (74.78%), Query Frame = 2 Query: 140 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484 K ++K E+ E+R AE +IR KYPDRIPVIVEKA K+ + D+DKKKYLVP+DL+VGQF +++RKRI+L E A+F FV N +P T M +Y+++ +ED FLY+ YS E+ +G Sbjct: 2 KWAYKEENNFEKRRAEGDKIRRKYPDRIPVIVEKAPKSKLHDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPQTMTTMGQLYQDHHEEDLFLYIAYSDESVYG 116
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30 Identity = 64/118 (54.24%), Postives = 84/118 (71.19%), Query Frame = 2 Query: 134 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDE-DGFLYMTYSGENTFG 484 M FK E LE R ESA + YPDRIPVIVEK ++++P+++K+KYLVP ++ VGQF++++R R+ LS A+FVFV NTLP T LM ++YE KDE DGFLY+ YS E TFG Sbjct: 1 MKPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQFIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118 The following BLAST results are available for this feature:
BLAST of FC924994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC924994 ID=FC924994; Name=FC924994; organism=Citrus clementina; type=EST; length=705bpback to top |