FC924994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: MLP3A_MOUSE (Microtubule-associated proteins 1A/1B light chain 3A OS=Mus musculus GN=Map1lc3a PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17 Identity = 45/116 (38.79%), Postives = 76/116 (65.52%), Query Frame = 2 Query: 149 FKLEHPLERRLAESARIREKYPDRIPVIVE--KAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFV-KNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGW 487 FK R E +IR+++P +IPVI+E K EK +P +DK K+LVP +++ + V ++R+R++L+ +A F+ V ++++ ++ IYE+ KDEDGFLYM Y+ + TFG+ Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEK-QLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 121
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: MLP3A_HUMAN (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17 Identity = 45/116 (38.79%), Postives = 76/116 (65.52%), Query Frame = 2 Query: 149 FKLEHPLERRLAESARIREKYPDRIPVIVE--KAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFV-KNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGW 487 FK R E +IR+++P +IPVI+E K EK +P +DK K+LVP +++ + V ++R+R++L+ +A F+ V ++++ ++ IYE+ KDEDGFLYM Y+ + TFG+ Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEK-QLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 121
BLAST of FC924994 vs. ExPASy Swiss-Prot
Match: LGG2_CAEEL (Protein lgg-2 OS=Caenorhabditis elegans GN=lgg-2 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15 Identity = 38/115 (33.04%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 146 SFKLEHPLERRLAESARIREKYPDRIPVIVEKAE-KTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFV-KNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 484 SFK P R + IR + P+++PVI+E+ + + +P +D+ K+LVP ++V + + +VR+R++L ++A F+ V + ++ MS +Y + +D DGF+YM Y+ + FG Sbjct: 16 SFKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 130 The following BLAST results are available for this feature:
BLAST of FC924994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924994 ID=FC924994; Name=FC924994; organism=Citrus clementina; type=EST; length=705bpback to top |