FC925008

Overview
NameFC925008
Unique NameFC925008
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD2_YEAST (6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Saccharomyces cerevisiae GN=GND2 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.633e-39
Identity = 83/165 (50.30%), Postives = 112/165 (67.88%), Query Frame = 1
Query:  142 KQLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            K +  +GL GLAVMGQNL LN A+ GF +  YNRT SKVD  +    K   +   G    E  V  ++KPR I++L+KAGAPVD  IK L  +++KGD IIDGGN  + +T RR + + + G+L++G GVSGGE+GAR GPSLMPGGS EA+ +I++I   +AA+
Sbjct:    3 KAVGDLGLVGLAVMGQNLILNAADHGFTVVAYNRTQSKVDRFLANEAKGKSI--IGATSIEDLVAKLKKPRKIMLLIKAGAPVDTLIKELVPHLDKGDIIIDGGNSHFPDTNRRYEELTKQGILFVGSGVSGGEDGARFGPSLMPGGSAEAWPHIKNIFQSIAAK 165          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_AGGAC (6-phosphogluconate dehydrogenase, decarboxylating OS=Aggregatibacter actinomycetemcomitans GN=gnd PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.744e-39
Identity = 80/160 (50.00%), Postives = 112/160 (70.00%), Query Frame = 1
Query:  157 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            IG+ GLAVMGQNL LN+ + GF +  YNRTTSKVDE +E A K  ++   G    E   N ++KPR ++++V+AG  VD  I  L  ++E GD IIDGGN  Y +T RR  A+ E G+ ++G GVSGGEEGARHGPS+MPGG+ EA+++++ +L  ++A+
Sbjct:    7 IGVIGLAVMGQNLILNMNDHGFKVVAYNRTTSKVDEFLEGAAKGTNI--IGAYSLEDLANKLEKPRKVMLMVRAGEVVDHFIDALLPHLEAGDIIIDGGNSNYPDTNRRVAALREKGIRFIGTGVSGGEEGARHGPSIMPGGNEEAWQFVKPVLQAISAK 164          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD1_YEAST (6-phosphogluconate dehydrogenase, decarboxylating 1 OS=Saccharomyces cerevisiae GN=GND1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.075e-38
Identity = 79/159 (49.69%), Postives = 110/159 (69.18%), Query Frame = 1
Query:  160 GLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            GL GLAVMGQNL LN A+ GF +  YNRT SKVD  +    K   +   G    E F++ +++PR +++LVKAGAPVD  I  +   +EKGD IIDGGN  + ++ RR + + + G+L++G GVSGGEEGAR+GPSLMPGGS EA+ +I++I   ++A+
Sbjct:    6 GLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSI--IGATSIEDFISKLKRPRKVMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGPSLMPGGSEEAWPHIKNIFQSISAK 162          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAW (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain MW2) GN=gnd PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.169e-37
Identity = 80/161 (49.69%), Postives = 112/161 (69.57%), Query Frame = 1
Query:  154 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            +IG+ GLAVMG+NLA NI  +G+ +SV+NR++ K D  VE +K +   P +     E FVNS++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+
Sbjct:    4 QIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAK 161          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAS (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain MSSA476) GN=gnd PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.169e-37
Identity = 80/161 (49.69%), Postives = 112/161 (69.57%), Query Frame = 1
Query:  154 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            +IG+ GLAVMG+NLA NI  +G+ +SV+NR++ K D  VE +K +   P +     E FVNS++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+
Sbjct:    4 QIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAK 161          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAR (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain MRSA252) GN=gnd PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.169e-37
Identity = 80/161 (49.69%), Postives = 112/161 (69.57%), Query Frame = 1
Query:  154 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            +IG+ GLAVMG+NLA NI  +G+ +SV+NR++ K D  VE +K +   P +     E FVNS++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+
Sbjct:    4 QIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAK 161          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAN (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain N315) GN=gnd PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.169e-37
Identity = 80/161 (49.69%), Postives = 112/161 (69.57%), Query Frame = 1
Query:  154 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            +IG+ GLAVMG+NLA NI  +G+ +SV+NR++ K D  VE +K +   P +     E FVNS++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+
Sbjct:    4 QIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAK 161          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAC (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain COL) GN=gnd PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.169e-37
Identity = 80/161 (49.69%), Postives = 112/161 (69.57%), Query Frame = 1
Query:  154 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            +IG+ GLAVMG+NLA NI  +G+ +SV+NR++ K D  VE +K +   P +     E FVNS++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+
Sbjct:    4 QIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAK 161          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_BUCAI (6-phosphogluconate dehydrogenase, decarboxylating OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gnd PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.993e-37
Identity = 74/161 (45.96%), Postives = 115/161 (71.43%), Query Frame = 1
Query:  154 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            +IG+ G+AVMG+NLALNI  K + +S++NRT S  +E   + KK+  +P F  +D   F++S+ KPR I+++V++G   DETIK +  Y+EK D +ID GN +Y++T RR + +++  + ++GMGVSGGE GA +GPS+MPGG  EAYK +  +L K++A+
Sbjct:    5 QIGVVGMAVMGRNLALNIESKNYSVSIFNRTRSVTEEVFNQNKKKNIVPYFSIKD---FIDSLLKPRCILLMVQSGKATDETIKMILPYLEKEDILIDAGNTFYKDTIRRNEKLSKYEINFIGMGVSGGELGALNGPSIMPGGQKEAYKLVLPMLEKISAK 162          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAM (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gnd PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.603e-37
Identity = 80/161 (49.69%), Postives = 111/161 (68.94%), Query Frame = 1
Query:  154 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            +IG+ GLAVMG+NLA NI   G+ +SV+NR++ K D  VE +K +   P +     E FVNS++KPR I+++V+AG   D TI +L   ++ GD +IDGGN  Y++T RR KA+A+  + ++GMGVSGGE GA  GPSLMPGG  EAY  + DIL  +AA+
Sbjct:    4 QIGVIGLAVMGKNLAWNIESHGYSVSVFNRSSEKTDLMVEESKGKNIHPTYSL---EEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNTNYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAAK 161          
The following BLAST results are available for this feature:
BLAST of FC925008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
6PGD2_YEAST3.633e-3950.306-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_AGGAC4.744e-3950.006-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD1_YEAST3.075e-3849.696-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAW1.169e-3749.696-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAS1.169e-3749.696-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAR1.169e-3749.696-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAN1.169e-3749.696-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAC1.169e-3749.696-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_BUCAI1.993e-3745.966-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAM2.603e-3749.696-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YO06FM1 TF Citrus clementina cDNA clone KN0AAP1YO06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925008 ID=FC925008; Name=FC925008; organism=Citrus clementina; type=EST; length=640bp
TTATGTTTATAGAGTCTCTGCTCTGCTAATCCCAGATCACATTTTGGGTT
GATTTGTCTGAATTTTCATTCTCTTGTTTTTGCATCAGATTTTAGAAGAA
GAAGAAGAAGAATTTTTTAAGAGGAAGATATGGTTGAGGGCAAACAACTT
ACGAGAATAGGCCTTGCTGGTCTGGCGGTCATGGGCCAAAATCTCGCCCT
CAACATTGCTGAAAAAGGCTTTCCCATTTCTGTTTATAACCGAACTACCT
CCAAAGTTGATGAGACAGTTGAAAGAGCTAAAAAGGAGGGAGATTTGCCT
TTATTTGGTTTCCGTGATCCTGAATCATTTGTCAATTCAATCCAAAAACC
TCGGGTGATAATCATGCTTGTTAAAGCTGGTGCACCTGTTGACGAAACCA
TTAAGACCCTCTCTGCTTACATGGAGAAAGGTGATTGCATCATTGATGGG
GGTAATGAGTGGTATGAGAACACCGAGAGAAGAGAGAAAGCCATGGCTGA
ATTGGGTTTGCTCTACCTTGGAATGGGAGTTTCAGGTGGTGAAGAGGGTG
CAAGACATGGTCCTTCTTTGATGCCTGGAGGATCATTCGAGGCTTACAAG
TATATTGAAGACATTCTTCTAAAGGTCGCGGCTCAAGTTC
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