FC925008

Overview
NameFC925008
Unique NameFC925008
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_LACLA (6-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. lactis GN=gnd PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.910e-36
Identity = 75/159 (47.17%), Postives = 110/159 (69.18%), Query Frame = 1
Query:  160 GLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            G+ G+AVMG+NLALN+  +G+ +++YNRTTSK +E     K+  D  L   +  E FV S++KPR I+++V+AGA  D TIK+L   ++KGD +IDGGN  + +T RR   +A+ G+ ++G GVSGGE+GA  GPS+MPGG  EAY  +  I  ++AA+
Sbjct:    7 GVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVY---KEHQDKNLVLTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPLLDKGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGPSMMPGGQKEAYDLVAPIFEQIAAK 162          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_KLEPN (6-phosphogluconate dehydrogenase, decarboxylating OS=Klebsiella pneumoniae GN=gnd PE=3 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 4.910e-36
Identity = 73/160 (45.62%), Postives = 111/160 (69.38%), Query Frame = 1
Query:  154 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAA 633
            +IG+ G+AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P +  ++   FV S++ PR I+++VKAGA  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL ++AA
Sbjct:    5 QIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENTGKKLVPYYTVQE---FVESLETPRRILLMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILKQIAA 161          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_CUNEL (6-phosphogluconate dehydrogenase, decarboxylating OS=Cunninghamella elegans GN=6-PGD PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 77/160 (48.12%), Postives = 110/160 (68.75%), Query Frame = 1
Query:  157 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            IGL GLAVMGQNL LN+ + GF +  YNRTTSKVD+ +    K  ++   G    E     +++PR +++LVKAG+ VD  I  L  ++E+GD IIDGGN  + ++ RR K +   G+L++G GVSGGEEGAR+GPSLMPGG+ +A+++I+ I   +AA+
Sbjct:    8 IGLIGLAVMGQNLILNMNDHGFVVCAYNRTTSKVDDFLANEAKGTNV--VGAHSVEELCAKLKRPRKVMLLVKAGSAVDAFIDQLLPHLEEGDIIIDGGNSHFPDSIRRTKELEAKGILFVGSGVSGGEEGARYGPSLMPGGNSKAWEHIQPIFQAIAAK 165          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_BACLI (6-phosphogluconate dehydrogenase, decarboxylating OS=Bacillus licheniformis GN=gntZ PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.412e-36
Identity = 78/161 (48.45%), Postives = 106/161 (65.84%), Query Frame = 1
Query:  157 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQV 639
            IG+ GL VMG N+ALN+A KG  ++VYN T    D+ V+   K G   +  + + E FV S++KPR I ++V AG PVD  I +L   +E+GD I+DGGN  YE+TERR  ++   G+ YLG+G+SGGE GA  GPS+MPGG  + Y+    IL K+AAQV
Sbjct:    5 IGVIGLGVMGSNIALNMASKGEQVAVYNYTRDLTDQLVQ---KTGGQTVKPYYELEDFVQSLEKPRKIFLMVTAGKPVDSVIDSLVPLLEEGDVIMDGGNSHYEDTERRYDSLKAKGIGYLGIGISGGEVGALKGPSIMPGGDRDVYEKAAPILTKIAAQV 162          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD9_ECOLX (6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia coli GN=gnd PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.094e-35
Identity = 72/160 (45.00%), Postives = 111/160 (69.38%), Query Frame = 1
Query:  154 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAA 633
            +IG+ G+AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P +  ++   FV S++ PR I+++VKAG+  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL ++AA
Sbjct:    5 QIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVQE---FVESLETPRRILLMVKAGSGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILKQIAA 161          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_DROSI (6-phosphogluconate dehydrogenase, decarboxylating OS=Drosophila simulans GN=Pgd PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.428e-35
Identity = 79/160 (49.38%), Postives = 105/160 (65.62%), Query Frame = 1
Query:  157 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            I L GLAVMGQNL LN+ EKGF +  YNRT +KV E +    K  ++   G    +  V+ ++ PR +++LVK G+ VD+ I+ L   +  GD IIDGGN  Y++T RR   +A+LGLLY+G GVSGGEEGARHGPSLMPGG   A+  I+ I   + A+
Sbjct:    7 IALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFLANEAKGTNV--IGADSLKDMVSKLKSPRKVMLLVKGGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLLYVGSGVSGGEEGARHGPSLMPGGHEAAWPLIQPIFQAICAK 164          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_HUMAN (6-phosphogluconate dehydrogenase, decarboxylating OS=Homo sapiens GN=PGD PE=1 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 1.866e-35
Identity = 79/161 (49.07%), Postives = 109/161 (67.70%), Query Frame = 1
Query:  157 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQV 639
            I L GLAVMGQNL LN+ + GF +  +NRT SKVD+ +    K     + G +  +  V+ ++KPR II+LVKAG  VD+ I+ L   ++ GD IIDGGN  Y +T RR + +   G+L++G GVSGGEEGAR+GPSLMPGG+ EA+ +I+ I   +AA+V
Sbjct:    6 IALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK--GTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGPSLMPGGNKEAWPHIKTIFQGIAAKV 164          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_MOUSE (6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus GN=Pgd PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.437e-35
Identity = 78/161 (48.45%), Postives = 109/161 (67.70%), Query Frame = 1
Query:  157 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQV 639
            I L GLAVMGQNL LN+ + GF +  +NRT SKVD+ +    K     + G +  +  V+ ++KPR +I+LVKAG  VD+ I+ L   ++ GD IIDGGN  Y +T RR + +   G+L++G GVSGGEEGAR+GPSLMPGG+ EA+ +I+ I   +AA+V
Sbjct:    6 IALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK--GTKVVGAQSLKDMVSKLKKPRRVILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGPSLMPGGNKEAWPHIKAIFQAIAAKV 164          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_SHEEP (6-phosphogluconate dehydrogenase, decarboxylating OS=Ovis aries GN=PGD PE=1 SV=4)

HSP 1 Score: 148.288 bits (373), Expect = 3.182e-35
Identity = 79/161 (49.07%), Postives = 108/161 (67.08%), Query Frame = 1
Query:  157 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQV 639
            I L GLAVMGQNL LN+ + GF +  +NRT SKVD+ +    K     + G    E  V+ ++KPR II+LVKAG  VD  I+ L   ++ GD IIDGGN  Y +T RR + + + G+L++G GVSGGE+GAR+GPSLMPGG+ EA+ +I+ I   +AA+V
Sbjct:    6 IALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK--GTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGPSLMPGGNKEAWPHIKAIFQGIAAKV 164          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_LACLM (6-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gnd PE=1 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 3.182e-35
Identity = 74/159 (46.54%), Postives = 109/159 (68.55%), Query Frame = 1
Query:  160 GLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            G+ G+AVMG+NLALN+  +G+ +++YNRTTSK +E     K+  D  L   +  E FV S++KPR I+++V+AGA  D TIK+L   ++ GD +IDGGN  + +T RR   +A+ G+ ++G GVSGGE+GA  GPS+MPGG  EAY  +  I  ++AA+
Sbjct:    7 GVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVY---KEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGPSMMPGGQKEAYDLVAPIFEQIAAK 162          
The following BLAST results are available for this feature:
BLAST of FC925008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
6PGD_LACLA4.910e-3647.176-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_KLEPN4.910e-3645.636-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CUNEL6.412e-3648.136-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_BACLI6.412e-3648.456-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD9_ECOLX1.094e-3545.006-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_DROSI1.428e-3549.386-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_HUMAN1.866e-3549.076-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_MOUSE2.437e-3548.456-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHEEP3.182e-3549.076-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_LACLM3.182e-3546.546-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YO06FM1 TF Citrus clementina cDNA clone KN0AAP1YO06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925008 ID=FC925008; Name=FC925008; organism=Citrus clementina; type=EST; length=640bp
TTATGTTTATAGAGTCTCTGCTCTGCTAATCCCAGATCACATTTTGGGTT
GATTTGTCTGAATTTTCATTCTCTTGTTTTTGCATCAGATTTTAGAAGAA
GAAGAAGAAGAATTTTTTAAGAGGAAGATATGGTTGAGGGCAAACAACTT
ACGAGAATAGGCCTTGCTGGTCTGGCGGTCATGGGCCAAAATCTCGCCCT
CAACATTGCTGAAAAAGGCTTTCCCATTTCTGTTTATAACCGAACTACCT
CCAAAGTTGATGAGACAGTTGAAAGAGCTAAAAAGGAGGGAGATTTGCCT
TTATTTGGTTTCCGTGATCCTGAATCATTTGTCAATTCAATCCAAAAACC
TCGGGTGATAATCATGCTTGTTAAAGCTGGTGCACCTGTTGACGAAACCA
TTAAGACCCTCTCTGCTTACATGGAGAAAGGTGATTGCATCATTGATGGG
GGTAATGAGTGGTATGAGAACACCGAGAGAAGAGAGAAAGCCATGGCTGA
ATTGGGTTTGCTCTACCTTGGAATGGGAGTTTCAGGTGGTGAAGAGGGTG
CAAGACATGGTCCTTCTTTGATGCCTGGAGGATCATTCGAGGCTTACAAG
TATATTGAAGACATTCTTCTAAAGGTCGCGGCTCAAGTTC
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