FC925008

Overview
NameFC925008
Unique NameFC925008
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_CAEEL (6-phosphogluconate dehydrogenase, decarboxylating OS=Caenorhabditis elegans GN=T25B9.9 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 7.089e-35
Identity = 72/160 (45.00%), Postives = 106/160 (66.25%), Query Frame = 1
Query:  157 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            I + GLAVMGQNL LN+ + GF +  +NRT   VD+ +    K     + G    E     +++PR ++ML+KAG PVD  I  +  ++E+GD IIDGGN  Y ++ RR + +A  G++++G GVSGGEEGAR GPSLMPGG+ +A+ +++DI  K+AA+
Sbjct:    6 IAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAK--GTKIIGAHSIEEMCKKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIMFVGCGVSGGEEGARFGPSLMPGGNPKAWPHLKDIFQKIAAK 163          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_CITAM (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Citrobacter amalonaticus GN=gnd PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.063e-34
Identity = 71/153 (46.41%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  175 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAA 633
            AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P +  ++   FV S++ PR I+++VKAGA  D  I +L  Y++KGD IIDGGN ++++T RR + ++E G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL ++AA
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVQE---FVESLETPRRILLMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSEEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILKQIAA 150          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_CERCA (6-phosphogluconate dehydrogenase, decarboxylating OS=Ceratitis capitata GN=Pgd PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.063e-34
Identity = 77/160 (48.12%), Postives = 104/160 (65.00%), Query Frame = 1
Query:  157 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            I L GLAVMGQNL LN+ +KGF +  YNRT  KV++ ++   K  ++   G    +  VN ++ PR I++LVKAG+ VD+ I+ L   +  GD IIDGGN  Y++T RR   +    +LY+G GVSGGEEGARHGPSLMPGG  EA+  I+ I   + A+
Sbjct:    7 IALIGLAVMGQNLVLNMNDKGFVVCAYNRTVEKVNQFLKNEAKGTNV--IGATSLQDMVNKLKLPRKIMLLVKAGSAVDDFIQQLVPLLSPGDVIIDGGNSEYQDTARRCDELRAKKILYVGSGVSGGEEGARHGPSLMPGGHPEAWPLIQPIFQSICAK 164          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_CITFR (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Citrobacter freundii GN=gnd PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.694e-34
Identity = 71/153 (46.41%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  175 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAA 633
            AVMG+NLALNI  +G+ +S++NR+  K +E V     +  +P +  ++   FV S++ PR I+++VKAGA  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVVAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAA 150          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_CITDI (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Citrobacter diversus GN=gnd PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.694e-34
Identity = 71/153 (46.41%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  175 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAA 633
            AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P +  ++   FV S++ PR I+++VKAGA  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAA 150          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_SHISO (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella sonnei GN=gnd PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.518e-34
Identity = 70/153 (45.75%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  175 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAA 633
            AVMG+NLALNI  +G+ +S++NR+  K +E +     +  +P +  ++   FV S++ PR I+++VKAGA  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAA 150          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIDY (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella dysenteriae GN=gnd PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.518e-34
Identity = 70/153 (45.75%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  175 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAA 633
            AVMG+NLALNI  +G+ +S++NR+  K +E +     +  +P +  ++   FV S++ PR I+++VKAGA  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAA 150          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIBO (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella boydii GN=gnd PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.518e-34
Identity = 70/153 (45.75%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  175 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAA 633
            AVMG+NLALNI  +G+ +S++NR+  K +E +     +  +P +  ++   FV S++ PR I+++VKAGA  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAA 150          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_ESCVU (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Escherichia vulneris GN=gnd PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.024e-33
Identity = 71/153 (46.41%), Postives = 104/153 (67.97%), Query Frame = 1
Query:  175 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAA 633
            AVMG+NLALNI  +G+ +SV+NR+  K +E V     +  +P +  ++   FV S++ PR I+++V+AGA  D  I +L  Y++KGD IIDGGN ++ +T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL K+AA
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVVAENPGKKLVPYYTVQE---FVESLETPRRILLMVQAGAGTDAAINSLKPYLDKGDIIIDGGNTFFHDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAA 150          
BLAST of FC925008 vs. ExPASy Swiss-Prot
Match: 6PGD_KLETE (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Klebsiella terrigena GN=gnd PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.746e-33
Identity = 70/154 (45.45%), Postives = 106/154 (68.83%), Query Frame = 1
Query:  175 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGDLPLFGFRDPESFVNSIQKPRVIIMLVKAGAPVDETIKTLSAYMEKGDCIIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYKYIEDILLKVAAQ 636
            AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P +  ++   FV S++ PR I+++VKAGA  D  I +L  Y++KGD IIDGGN ++++T RR + ++  G  ++G GVSGGEEGA  GPS+MPGG  EAY+ +  IL ++AA+
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPHYTVKE---FVESLETPRRILLMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSADGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILEQIAAR 151          
The following BLAST results are available for this feature:
BLAST of FC925008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
6PGD_CAEEL7.089e-3545.006-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CITAM2.063e-3446.416-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CERCA2.063e-3448.136-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CITFR2.694e-3446.416-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CITDI2.694e-3446.416-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHISO3.518e-3445.756-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIDY3.518e-3445.756-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIBO3.518e-3445.756-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_ESCVU1.024e-3346.416-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_KLETE1.746e-3345.456-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YO06FM1 TF Citrus clementina cDNA clone KN0AAP1YO06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925008 ID=FC925008; Name=FC925008; organism=Citrus clementina; type=EST; length=640bp
TTATGTTTATAGAGTCTCTGCTCTGCTAATCCCAGATCACATTTTGGGTT
GATTTGTCTGAATTTTCATTCTCTTGTTTTTGCATCAGATTTTAGAAGAA
GAAGAAGAAGAATTTTTTAAGAGGAAGATATGGTTGAGGGCAAACAACTT
ACGAGAATAGGCCTTGCTGGTCTGGCGGTCATGGGCCAAAATCTCGCCCT
CAACATTGCTGAAAAAGGCTTTCCCATTTCTGTTTATAACCGAACTACCT
CCAAAGTTGATGAGACAGTTGAAAGAGCTAAAAAGGAGGGAGATTTGCCT
TTATTTGGTTTCCGTGATCCTGAATCATTTGTCAATTCAATCCAAAAACC
TCGGGTGATAATCATGCTTGTTAAAGCTGGTGCACCTGTTGACGAAACCA
TTAAGACCCTCTCTGCTTACATGGAGAAAGGTGATTGCATCATTGATGGG
GGTAATGAGTGGTATGAGAACACCGAGAGAAGAGAGAAAGCCATGGCTGA
ATTGGGTTTGCTCTACCTTGGAATGGGAGTTTCAGGTGGTGAAGAGGGTG
CAAGACATGGTCCTTCTTTGATGCCTGGAGGATCATTCGAGGCTTACAAG
TATATTGAAGACATTCTTCTAAAGGTCGCGGCTCAAGTTC
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