FC925021

Overview
NameFC925021
Unique NameFC925021
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14677 contig Ccv1_Contig14677:26..653. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21
Identity = 60/150 (40.00%), Postives = 85/150 (56.67%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGV---VKSNTKCSTVGIQ-GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E K   F+RA +AEF+A  LF++IS+ + +G    +KSN     V     ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG +IIGT  L
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQL 151          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 60/150 (40.00%), Postives = 85/150 (56.67%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGV---VKSNTKCSTVGIQ-GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E K   F+RA +AEF+A  LF++IS+ + +G    +KSN     V     ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG +IIGT  L
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQL 151          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.126e-20
Identity = 61/156 (39.10%), Postives = 86/156 (55.13%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E+K   F+RA +AEF+A  LF++IS+ + +G          +V+ N K S         AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +AHG   G GLG +IIGT  L
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSL--------AFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSL--GRNDLAHGVNSGQGLGIEIIGTLQL 149          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.126e-20
Identity = 59/148 (39.86%), Postives = 84/148 (56.76%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E K   F+RA +AEF+AT LF++IS+ + +G      N + +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RAL Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG +IIGT  L
Sbjct:    4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSL--GRNDLADGVNSGQGLGIEIIGTLQL 149          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 96.6709 bits (239), Expect = 1.055e-19
Identity = 60/156 (38.46%), Postives = 86/156 (55.13%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E+K   F+RA +AEF+A  LF++IS+ + +G          +V+ N K S         AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI  + ++ G   +     L  G N +A G   G GLG +IIGT  L
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSL--------AFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSL--GRNDLARGVNSGQGLGIEIIGTLQL 149          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.055e-19
Identity = 58/148 (39.19%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E K   F+RA +AEF+A  LF++IS+ + +G      N + +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RAL Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG +IIGT  L
Sbjct:    4 EFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSL--GRNDLADGVNSGQGLGIEIIGTLQL 149          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.055e-19
Identity = 58/150 (38.67%), Postives = 84/150 (56.00%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E K   F+RA +AEF+A  LF++IS+ + +G    V  + T  +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG +IIGT  L
Sbjct:    4 EFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSL--GLNSLAPGVDSGQGLGIEIIGTLQL 151          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.055e-19
Identity = 58/150 (38.67%), Postives = 84/150 (56.00%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E K   F+RA +AEF+A  LF++IS+ + +G    V  + T  +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG +IIGT  L
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSL--GRNELAPGVNSGQGLGIEIIGTLQL 151          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.990e-18
Identity = 57/155 (36.77%), Postives = 86/155 (55.48%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-----VKSNTKCSTVG----IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E K  +F+RA IAEF+A  LF++IS+   +G       K+N    TVG    I  ++ AFG  I  +      +SG H+NPAVTLG  L+ ++S+ +A+ Y++ QCLGA+    ++ G     +   L  G N ++ G   G GLG +I+ TF L
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKAN---QTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSL--GLNGLSPGVSAGQGLGVEILVTFQL 153          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E+ S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+V Q +GAI GAG++ G       G LA   N + +    G  +  ++I TF L
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLA--VNSLNNNTTPGQAVVVEMILTFQL 142          
The following BLAST results are available for this feature:
BLAST of FC925021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
AQP1_BOVIN9.545e-2140.00Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP1.628e-2040.00Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE2.126e-2039.10Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_HUMAN2.126e-2039.86Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_RAT1.055e-1938.46Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_PONAB1.055e-1939.19Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_PIG1.055e-1938.67Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_CANFA1.055e-1938.67Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQPA_RANES1.990e-1836.77Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP5_PIG3.177e-1636.30Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YP18FM1 TF Citrus clementina cDNA clone KN0AAP6YP18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925021 ID=FC925021; Name=FC925021; organism=Citrus clementina; type=EST; length=628bp
CAAAAAAGCAAGTGCTTCTTATTGACTGTTTTGTGTTTTTGAGGGACTAG
CAGAAATGGAAGGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTC
GCCGAGAGGCAGCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGGA
CTACGTTGAGCCCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGT
CTTGGTCGTTTTACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTT
TTCTTGTACATCTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATAC
CAAGTGCTCAACCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCA
TGATCTTCGTGCTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATC
AACCCGGCGGTGACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGAC
ACGTGCACTTTTCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTG
CTGGCGTTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCC
GGCGGTGCCAACGTCGTAGCTCATGGCTACCCCAAGGGTGATGGTCTTGG
TGCCCAGATTATTGGTACTTTTGTTCTT
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