FC925021

Overview
NameFC925021
Unique NameFC925021
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 2
Query:  185 PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVA 571
            PGEL      +A +AEFI+T +F++    + M   K       +  G+   + A    +FV V   A ISGGH+NPAVT G F+   +SL +AL Y V Q LG++    ++K   G    G  +  A V A
Sbjct:   11 PGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGA 141          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12
Identity = 46/123 (37.40%), Postives = 66/123 (53.66%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA 559
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA+FY+  Q LGA+ GA ++         G LA  A
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNA 120          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12
Identity = 46/123 (37.40%), Postives = 66/123 (53.66%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA 559
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA+FY+  Q LGA+ GA ++         G LA  A
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNA 120          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12
Identity = 49/141 (34.75%), Postives = 71/141 (50.35%), Query Frame = 2
Query:  206 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            + +R   AE I T L + I   +  GV  S        +  IA  FG +I  +V C   +SG HINPAVT GL +   +S+ +A+FY+++QC+GAI G+ ++K    A   G L      +A G     G   +   TFVL
Sbjct:   24 TIWRCLAAELIGTLLLVLIGTGSCTGVQISEGDV----VVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGTLC--MTSLAPGVTPPMGFLVEACITFVL 158          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.784e-12
Identity = 52/149 (34.90%), Postives = 74/149 (49.66%), Query Frame = 2
Query:  188 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            GE     F+R  + E + TFLF++I V   M    + TK ST G    A A G  + V V  TAG  ISGGH+NPAVTL L +   ++L R+  Y+  Q L +     +++   G      LA   + +A G     G+ A+ + TF L
Sbjct:   10 GEASEPDFFRGVLGELVLTFLFVFIGVGAAM-TDGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGG-----LATPVHALAEGVGPLQGVVAEAVFTFSL 152          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.784e-12
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 511
            EL+S +F RA +AEF+AT LF++  + + +         S   +  IA AFG  I +LV     +SG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----QWASSPPSVLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL 104          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 2
Query:  215 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK 514
            +A +AEFI+T +F++  V + +   K          G+  +A   G  +FV V   A ISGGH+NPAVT GL L  ++++   +FY + Q LGAI GA +V+
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQ 121          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12
Identity = 53/148 (35.81%), Postives = 71/148 (47.97%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGT--FVL 628
            EL+S SF+RA  AEF AT  +++      +G     T    + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA  YM  Q LGA+ GA V+         G LA   N +  G   G     +I  T  FVL
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPGVSVGQATTVEIFLTLQFVL 143          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.748e-12
Identity = 43/120 (35.83%), Postives = 62/120 (51.67%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLA 550
            EL+S SF+RA  AEF AT  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA+ Y+V Q LGA+ GA V+         G LA
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLA 117          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.748e-12
Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = 2
Query:  191 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E+++  F+R+ I+E +A+F++++I      GV    +  S   +   A A G  +  L  C   ISG HINPAVTL L + R +S  RA  Y+  QC G I GA ++ G    G  G L    +  A      +  G + I TF++
Sbjct:   58 EIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSV--LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSA-ALAAWERFGVEFILTFLV 200          
The following BLAST results are available for this feature:
BLAST of FC925021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
TIP12_MAIZE1.249e-1235.11Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
AQP2_SHEEP1.249e-1237.40Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP2_BOVIN1.249e-1237.40Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
AQP_CICVR1.632e-1234.75Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
TIP43_MAIZE2.784e-1234.90Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
AQP2_RAT2.784e-1239.25Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
TIP22_ORYSJ3.635e-1238.24Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
MIP_CANFA3.635e-1235.81Lens fiber major intrinsic protein OS=Canis famili... [more]
MIP_SHEEP4.748e-1235.83Lens fiber major intrinsic protein OS=Ovis aries G... [more]
BIB_DROME4.748e-1232.88Neurogenic protein big brain OS=Drosophila melanog... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YP18FM1 TF Citrus clementina cDNA clone KN0AAP6YP18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925021 ID=FC925021; Name=FC925021; organism=Citrus clementina; type=EST; length=628bp
CAAAAAAGCAAGTGCTTCTTATTGACTGTTTTGTGTTTTTGAGGGACTAG
CAGAAATGGAAGGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTC
GCCGAGAGGCAGCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGGA
CTACGTTGAGCCCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGT
CTTGGTCGTTTTACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTT
TTCTTGTACATCTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATAC
CAAGTGCTCAACCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCA
TGATCTTCGTGCTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATC
AACCCGGCGGTGACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGAC
ACGTGCACTTTTCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTG
CTGGCGTTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCC
GGCGGTGCCAACGTCGTAGCTCATGGCTACCCCAAGGGTGATGGTCTTGG
TGCCCAGATTATTGGTACTTTTGTTCTT
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