FC925032

Overview
NameFC925032
Unique NameFC925032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14591 contig Ccv1_Contig14591:1..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: ERP44_MOUSE (Endoplasmic reticulum resident protein ERp44 OS=Mus musculus GN=Erp44 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17
Identity = 53/188 (28.19%), Postives = 95/188 (50.53%), Query Frame = 2
Query:   44 ALVLTIACCMTAISAEENAESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPP---VVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEF 598
            +L+L +    T I+AE        + +LD  N  + ++  +  +V FYA WC   + L P +E+A+  +    P    VV A+VD ++ +  ++A +Y I  +PT+K+ RNG    +EY+G R    + +Y+++Q      EI+S ++ ++ +   K  IIG F     E +  +  +A  L  D  F
Sbjct:   15 SLLLLVTSIFTPITAE--------IASLDSENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEYPDKNQVVFARVDCDQHS--DIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSNPVHEIQSLDEVTN-LDRSKRNIIGYFEQKDSENYRVFERVASILHDDCAF 191          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: TXND5_HUMAN (Thioredoxin domain-containing protein 5 OS=Homo sapiens GN=TXNDC5 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17
Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = 2
Query:   56 TIACCMTAISAEENAESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 442
            T+      + A E    K  VL L  +NF DT+++     ++FYAPWCGHCK LAP +E+ + +       V +A+VD   E N  + S+Y +RG+PT+ + R GGK + E+ G R+ D +  ++  Q+
Sbjct:  304 TVTPSEAPVLAAEPEADKGTVLALTENNFDDTIAE-GITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN--ICSKYSVRGYPTLLLFR-GGKKVSEHSGGRDLDSLHRFVLSQA 428          

HSP 2 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = 2
Query:  101 ESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQ 439
            E K+ +  L  SNF   V++ +  + +F+APWCGHCK LAP +E+ A  L  H   V + KVD  +  + EL S  ++RG+PT+   R+ GK + +YKG R+ + + EY++ Q
Sbjct:  186 ELKQGLYELSASNFELHVAQGDHFI-KFFAPWCGHCKALAPTWEQLALGL-EHSETVKIGKVDCTQ--HYELCSGNQVRGYPTLLWFRD-GKKVDQYKGKRDLESLREYVESQ 293          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: PDIA6_HUMAN (Protein disulfide-isomerase A6 OS=Homo sapiens GN=PDIA6 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17
Identity = 56/165 (33.94%), Postives = 86/165 (52.12%), Query Frame = 2
Query:   47 LVLTIACCMTAISAEENAESKEFVLTLDHSNFS-DTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIV--------EYLKKQSGPASAEIKSAEDASSFIGEKKVVI 514
            LVL +  C   ++      S + V+ L  SNF+ + +   +  +VEFYAPWCGHC++L PE++KAA+ L      V +  VDA++  +  L  QY ++GFPTIKI  +     ++Y+G R  + IV        + +K + G  S    S +   S    KK VI
Sbjct:    4 LVLGLVSCTFFLAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKAATALKD---VVKVGAVDADK--HHSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDRLGGRSGGYSSGKQGRSDSSSKKDVI 163          

HSP 2 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 58/153 (37.91%), Postives = 80/153 (52.29%), Query Frame = 2
Query:   95 NAESKEFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDP-PVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVE-----YLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPN 532
            ++ SK+ V+ L   +F   V    +  +VEFYAPWCGHCK L PE+  AASE+       V LA VDA    N+ LAS+Y IRGFPTIKI + G   + +Y G R    IV      +      P   EI + + A     E ++ ++ V P+
Sbjct:  155 DSSSKKDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDAT--VNQVLASRYGIRGFPTIKIFQKGESPV-DYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAKRTCEEHQLCVVAVLPH 304          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: PDIA6_RAT (Protein disulfide-isomerase A6 OS=Rattus norvegicus GN=Pdia6 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.873e-17
Identity = 55/166 (33.13%), Postives = 84/166 (50.60%), Query Frame = 2
Query:   47 LVLTIACCMTAISAEENAESKEFVLTLDHSNFS-DTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDA-NEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIV--------EYLKKQSGPASAEIKSAEDASSFIGEKKVVI 514
            LVL +  C   ++      S + V+ L  SNF+ + +   +  +VEFYAPWCGHC++L PE++KAAS L        + KV A N + ++ L  QY ++GFPTIKI        ++Y+G R  + IV        + +K + G  S    S +        KK V+
Sbjct:    4 LVLGLVSCTFFLAVSALYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKAASALKD------VVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRQLVKDRLGGRSGGYSSGKQGRGDSSSKKDVV 163          

HSP 2 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 56/153 (36.60%), Postives = 79/153 (51.63%), Query Frame = 2
Query:   95 NAESKEFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDP-PVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVE-----YLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPN 532
            ++ SK+ V+ L    F   V    +  +VEFYAPWCGHCK L PE+  AA+E+       V LA VDA    N+ LAS+Y I+GFPTIKI + G   + +Y G R    IV      +      P   EI + + A     E ++ ++ V P+
Sbjct:  155 DSSSKKDVVELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDAT--VNQVLASRYGIKGFPTIKIFQKGESPV-DYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAKKTCEEHQLCVVAVLPH 304          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: TMX3_HUMAN (Protein disulfide-isomerase TMX3 OS=Homo sapiens GN=TMX3 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 55/142 (38.73%), Postives = 81/142 (57.04%), Query Frame = 2
Query:   20 MASSRSILALVLTIACCMTAISAEENAESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 445
            MA+ +S  AL L    C T +  +     K FV  LD S F +     +  +V+FYAPWCGHCKKL P + +   E+ S   PV + K+DA   ++  +AS++ +RG+PTIK+L+  G     Y+GPR  D I+E+  + SG
Sbjct:    1 MAAWKSWTALRL----CATVVVLDM-VVCKGFVEDLDES-FKEN-RNDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSS--IASEFGVRGYPTIKLLK--GDLAYNYRGPRTKDDIIEFAHRVSG 131          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: TMX3_XENLA (Protein disulfide-isomerase TMX3 OS=Xenopus laevis GN=tmx3 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 2
Query:  158 KHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAE 475
            K +  +V+FYAPWCGHCKKL P + +   E+ +   P+ + K+DA       +AS++ +RGFPTIK L+  G     Y+GPR  + IVE+  + +GP    + S +
Sbjct:   40 KDDIWLVDFYAPWCGHCKKLEPVWNEVGIEIRTSGSPIRVGKIDAT--VYSSIASEFGVRGFPTIKALK--GDMAYNYRGPRTKEDIVEFANRVAGPLIRPLPSQQ 141          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: TIGA_ASPNG (Protein disulfide-isomerase tigA OS=Aspergillus niger GN=tigA PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16
Identity = 55/188 (29.26%), Postives = 91/188 (48.40%), Query Frame = 2
Query:  125 LDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG----------PASAEIKSAED--ASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQHA---KLLPRGESS 643
            L+ + F   V   N ++V F APWCGHCK LAP +E  A++    +P VV+AKVDA+ E  K  A +  + G+PTIK    G      Y+G R     +++L +++G            +  I S ++  AS+   +    +         +  + Y  +A+KL  + E+   + A   K+L +G S+
Sbjct:  145 LNDATFKGAVGGDNDVLVAFTAPWCGHCKNLAPTWEALANDFVL-EPNVVIAKVDADAENGKATAREQGVSGYPTIKFFPKGSTESVPYEGARSEQAFIDFLNEKTGTHRTVGGGLDTKAGTIASLDELIASTSAADLAAAVKKAATELKDKYAQYYVKVADKLSQNAEYAAKELARLEKILAKGGSA 331          

HSP 2 Score: 82.4185 bits (202), Expect = 2.674e-15
Identity = 49/169 (28.99%), Postives = 84/169 (49.70%), Query Frame = 2
Query:  116 VLTLDHSNFSDTVSKHNF-IVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG---------PASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDY 592
            V+ L   NF D V K     +VEF+APWCGHCK LAP YE+     +     V + KVDA+E  +++L  ++ ++GFPT+K         ++YKG R+ + +  ++ +++G         P+  E+ +       +G    V++     + G   +N     E L +D+
Sbjct:   21 VVDLVPKNFDDVVLKSGKPALVEFFAPWCGHCKNLAPVYEELGQAFAHASDKVTVGKVDADE--HRDLGRKFGVQGFPTLKWFDGKSDEPEDYKGGRDLESLSSFISEKTGVKPRGPKKEPSKVEMLNDATFKGAVGGDNDVLVAFTAPWCG-HCKNLAPTWEALANDF 186          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: TXND5_MOUSE (Thioredoxin domain-containing protein 5 OS=Mus musculus GN=Txndc5 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.852e-16
Identity = 44/121 (36.36%), Postives = 71/121 (58.68%), Query Frame = 2
Query:   80 ISAEENAESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQS 442
            + A E    K  VL L   +F DT+++     V+FYAPWCGHCK LAP +E+ + +       V +A+VD   E N  + S+Y +RG+PT+ + R GG+ + E+ G R+ D +  ++ +Q+
Sbjct:  297 VMAAEPTGDKGTVLALTEKSFEDTIAQ-GITFVKFYAPWCGHCKNLAPTWEELSKKEFPGLSDVTIAEVDCTAERN--VCSKYSVRGYPTLLLFR-GGEKVGEHNGGRDLDSLHSFVLRQA 413          

HSP 2 Score: 81.6481 bits (200), Expect = 4.561e-15
Identity = 44/129 (34.11%), Postives = 77/129 (59.69%), Query Frame = 2
Query:  101 ESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASS 487
            E K+ +  L  +NF   VS+ N  + +F+APWCGHCK LAP +E+ A  L  H   V + KVD  +  +  + S++++RG+PT+   R+ GK + +YKG R+ + + +Y++ Q   + A  ++ E + +
Sbjct:  172 ELKQGLYELSANNFELHVSQGNHFI-KFFAPWCGHCKALAPTWEQLALGL-EHSETVKIGKVDCTQ--HYAVCSEHQVRGYPTLLWFRD-GKKVDQYKGKRDLESLRDYVQSQLQGSEAAPETVEPSEA 295          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: PDIA6_MOUSE (Protein disulfide-isomerase A6 OS=Mus musculus GN=Pdia6 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.852e-16
Identity = 54/166 (32.53%), Postives = 83/166 (50.00%), Query Frame = 2
Query:   47 LVLTIACCMTAISAEENAESKEFVLTLDHSNFS-DTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDA-NEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIV--------EYLKKQSGPASAEIKSAEDASSFIGEKKVVI 514
            LVL +  C   ++      S + V+ L  SNF+ + +      +VEFYAPWCGHC++L PE++KAA+ L        + KV A N + ++ L  QY ++GFPTIKI        ++Y+G R  + IV        + +K + G  S    S +        KK V+
Sbjct:    4 LVLGLVSCTFFLAVSGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD------VVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRQLVKDRLGGRSGGYSSGKQGRGDSSSKKDVV 163          

HSP 2 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 56/153 (36.60%), Postives = 79/153 (51.63%), Query Frame = 2
Query:   95 NAESKEFVLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDP-PVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVE-----YLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPN 532
            ++ SK+ V+ L    F   V    +  +VEFYAPWCGHCK L PE+  AA+E+       V LA VDA    N+ LAS+Y I+GFPTIKI + G   + +Y G R    IV      +      P   EI + + A     E ++ ++ V P+
Sbjct:  155 DSSSKKDVVELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDAT--VNQVLASRYGIKGFPTIKIFQKGESPV-DYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAKKTCEEHQLCVVAVLPH 304          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: TMX3_PONAB (Protein disulfide-isomerase TMX3 OS=Pongo abelii GN=TMX3 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16
Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = 2
Query:   20 MASSRSILALVLTIACCMTAISAEENAESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG 445
            MA+ +S  AL L    C T +  +     K FV  LD S F +     +  +V+FYAPWCGHCKKL P + +   E+ S   PV + K+DA   ++  +AS++ +RG+PTIK+L+  G     ++GPR  D I+E+  + SG
Sbjct:    1 MAAWKSWAALRL----CATVVLLDM-VVCKGFVEDLDES-FKEN-RNDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSS--IASEFGVRGYPTIKLLK--GDLAYNHRGPRTKDDIIEFAHRVSG 131          
The following BLAST results are available for this feature:
BLAST of FC925032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ERP44_MOUSE2.857e-1728.19Endoplasmic reticulum resident protein ERp44 OS=Mu... [more]
TXND5_HUMAN3.731e-1735.66Thioredoxin domain-containing protein 5 OS=Homo sa... [more]
PDIA6_HUMAN3.731e-1733.94Protein disulfide-isomerase A6 OS=Homo sapiens GN=... [more]
PDIA6_RAT4.873e-1733.13Protein disulfide-isomerase A6 OS=Rattus norvegicu... [more]
TMX3_HUMAN6.365e-1738.73Protein disulfide-isomerase TMX3 OS=Homo sapiens G... [more]
TMX3_XENLA1.086e-1638.68Protein disulfide-isomerase TMX3 OS=Xenopus laevis... [more]
TIGA_ASPNG1.086e-1629.26Protein disulfide-isomerase tigA OS=Aspergillus ni... [more]
TXND5_MOUSE1.852e-1636.36Thioredoxin domain-containing protein 5 OS=Mus mus... [more]
PDIA6_MOUSE1.852e-1632.53Protein disulfide-isomerase A6 OS=Mus musculus GN=... [more]
TMX3_PONAB2.419e-1638.03Protein disulfide-isomerase TMX3 OS=Pongo abelii G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YO24FM1 TF Citrus clementina cDNA clone KN0AAP1YO24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925032 ID=FC925032; Name=FC925032; organism=Citrus clementina; type=EST; length=724bp
CTTATTTGCATCGACGATAATGGCGTCCAGTCGATCGATTTTAGCACTCG
TTCTGACGATCGCTTGTTGTATGACGGCGATCTCAGCCGAAGAAAATGCC
GAATCGAAGGAGTTCGTTTTGACTTTGGATCACTCAAACTTCTCTGACAC
TGTCAGTAAACACAATTTCATCGTCGTCGAATTCTACGCGCCTTGGTGTG
GTCACTGTAAAAAGCTAGCTCCAGAGTATGAGAAAGCTGCTTCCGAATTG
AGCAGTCATGACCCTCCGGTTGTTCTTGCGAAAGTTGATGCCAATGAAGA
AGCAAATAAAGAGCTGGCATCTCAATATGAGATTAGGGGTTTCCCCACAA
TTAAGATATTGAGAAATGGAGGAAAAACTATTCAAGAGTACAAAGGACCC
CGCGAGGCCGATGGTATCGTTGAATATTTGAAGAAACAAAGTGGTCCTGC
TTCTGCTGAAATTAAGTCGGCGGAAGATGCTAGTAGTTTCATCGGTGAGA
AGAAAGTGGTCATTATTGGTGTGTTTCCAAATTTCTCTGGAGAGGAGTTT
GAGAACTACACGGCTCTTGCTGAGAAATTGCGTTCTGATTATGAGTTTGG
TCACACTCAACATGCCAAGCTCCTTCCACGTGGGGAGTCATCAGTGACTG
GGCCAGTAGTTAGATTGCTCAAGCCTTTTGATGAACTCTTTTGTTGACTT
TGAGGACTTTTAAAGTGGATGCTC
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