FC925032

Overview
NameFC925032
Unique NameFC925032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14591 contig Ccv1_Contig14591:1..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: ERP44_BOVIN (Endoplasmic reticulum resident protein ERp44 OS=Bos taurus GN=ERP44 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 51/188 (27.13%), Postives = 93/188 (49.47%), Query Frame = 2
Query:   44 ALVLTIACCMTAISAEENAESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDP---PVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEF 598
            +L+L +    T ++AE        +++LD  N  D ++  +  +V FYA WC   + L P +E+A++ +    P    VV A+VD ++ +  ++A +Y I  +PT+K+ RNG    +EY+G R    + +Y+++Q      E+    + ++     K  IIG F     E +  +  +A  L  D  F
Sbjct:   15 SLLLLVTWVFTPVTAE--------IISLDTENIDDILNNADVALVNFYADWCRFSQMLHPIFEEASNVIKEEYPNANQVVFARVDCDQHS--DIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQELHDLAEITT-PDRSKRNIIGYFEQKDSENYRVFERVANILHDDCAF 191          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: PDIA6_CAEEL (Probable protein disulfide-isomerase A6 OS=Caenorhabditis elegans GN=tag-320 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 2
Query:   41 LALVLTIACCMTAISAEENAESKEFVLTLDHSNF-SDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDA-NEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPA-SAEIKSAEDASSFIG 496
            +AL+  +   +   S       K+ V+ L  +NF S  ++  +  +VEFYAPWCGHCK L PEY+KAAS L        +AKV A +   ++ +   Y ++GFPT+KI     K   +Y G R A  I + +  ++  A SA +      SS  G
Sbjct:    1 MALIKLLLASLAITSVCGMYSKKDDVVELTEANFQSKVINSDDIWIVEFYAPWCGHCKSLVPEYKKAASALKG------VAKVGAVDMTQHQSVGGPYNVQGFPTLKIFGADKKKPTDYNGQRTAQAIADSVLAEAKKAVSARLGGKSSGSSSSG 149          

HSP 2 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 58/168 (34.52%), Postives = 85/168 (50.60%), Query Frame = 2
Query:  116 VLTLDHSNFSDTVSKHNFI-VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGG--KTIQEYKGPREADGIVEY--LKKQSGPASAEI------KSAEDASSFIGEKKVVIIGVFPNF---SGEEFENYTALAEK 577
            V+ L  +NF D V     I +VEF+APWCGHCK L P+++ AASEL      V L  +DA    +  +A+++ IRGFPTIK    G      Q+Y G R++  IV +   + Q    + E+      +  EDA     EK++ I    P+      E   NY A+ ++
Sbjct:  166 VVELTDANFEDLVLNSKDIWLVEFFAPWCGHCKSLEPQWKAAASELKG---KVRLGALDAT--VHTVVANKFAIRGFPTIKYFAPGSDVSDAQDYDGGRQSSDIVAWASARAQENMPAPEVFEGINQQVVEDACK---EKQLCIFAFLPHILDCQSECRNNYLAMLKE 325          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: ERP44_HUMAN (Endoplasmic reticulum resident protein ERp44 OS=Homo sapiens GN=ERP44 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.568e-15
Identity = 49/188 (26.06%), Postives = 92/188 (48.94%), Query Frame = 2
Query:   44 ALVLTIACCMTAISAEENAESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDP---PVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEF 598
            +L+L +    T ++ E        + +LD  N  + ++  +  +V FYA WC   + L P +E+A+  +    P    VV A+VD ++ +  ++A +Y I  +PT+K+ RNG    +EY+G R    + +Y+++Q      EI+   + ++ +   K  IIG F     + +  +  +A  L  D  F
Sbjct:   15 SLLLLVTWVFTPVTTE--------ITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS--DIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDNYRVFERVANILHDDCAF 191          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: Y5025_DICDI (Putative protein disulfide-isomerase DDB_G0275025 OS=Dictyostelium discoideum GN=DDB_G0275025 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.047e-15
Identity = 48/112 (42.86%), Postives = 64/112 (57.14%), Query Frame = 2
Query:  116 VLTLDHSNFSDTV--SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDA-NEEANKELASQYEIRGFPTIKILRNGGKT-----IQEYKGPREADGIVEY 427
            V+ L   NF   V  S+ N++V EFYAPWCGHCK L PEYEK ++ L        L K+ A N +  KEL  QY+I+GFPT+K      KT      ++Y+G R A  I ++
Sbjct:   29 VINLTKKNFQQQVLNSQQNWMV-EFYAPWCGHCKSLKPEYEKVSNNLKG------LVKIGAINCDEEKELCGQYQIQGFPTLKFFSTNPKTGKKGQPEDYQGARSASEIAKF 133          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: PDIA5_HUMAN (Protein disulfide-isomerase A5 OS=Homo sapiens GN=PDIA5 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.674e-15
Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 2
Query:  116 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSH-DPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGP--READGIVEYLKKQSGPASAEIKSAEDASSFI 493
            V  L   +F   V +H+ ++V F+APWCGHCKK+ PE+EKAA  L    D   VLA VDA    NK LA ++ I  FPT+K  +NG    ++Y  P  R     +E+++    P   E    E  +S +
Sbjct:  278 VYHLTDEDFDQFVKEHSSVLVMFHAPWCGHCKKMKPEFEKAAEALHGEADSSGVLAAVDAT--VNKALAERFHISEFPTLKYFKNG----EKYAVPVLRTKKKFLEWMQNPEAPPPPEPTWEEQQTSVL 400          

HSP 2 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = 2
Query:  101 ESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLK 433
            E +  VL L   NF +T+ K    +V FYAPWC HCKK+ P +  A ++    D  +  A VD  ++ N++L  Q  ++G+PT     + GK  ++Y   R   G   Y++
Sbjct:  394 EQQTSVLHLVGDNFRETLKKKKHTLVMFYAPWCPHCKKVIPHF-TATADAFKDDRKIACAAVDCVKDKNQDLCQQEAVKGYPTFHYY-HYGKFAEKYDSDRTELGFTNYIR 502          

HSP 3 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 39/121 (32.23%), Postives = 61/121 (50.41%), Query Frame = 2
Query:   89 EENAESKEFVLTLDHSNFSDTVSKHNF-IVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP 448
            EE+  +K+ V      +F   + K    +++ FYAPWC  CK++ P ++KAA++L  H    VLA ++      + +  +Y +RGFPTI     G    Q       A+ IVE+LK    P
Sbjct:  145 EEDPGAKDVVHLDSEKDFRRLLKKEEKPLLIMFYAPWCSMCKRMMPHFQKAATQLRGH---AVLAGMNVYSSEFENIKEEYSVRGFPTICYFEKGRFLFQYDNYGSTAEDIVEWLKNPQPP 262          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: PDIA5_BOVIN (Protein disulfide-isomerase A5 OS=Bos taurus GN=PDIA5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15
Identity = 47/129 (36.43%), Postives = 68/129 (52.71%), Query Frame = 2
Query:  116 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSH-DPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGP--READGIVEYLKKQSGPASAEIKSAEDASSFI 493
            V  L   +F   V +H+ ++V F+APWCGHCKK+ PE+E AA  L    D   VLA VDA    NK LA ++ I  FPT+K  +NG    ++Y  P  R     +E+++    P   +    E  +S +
Sbjct:  280 VYHLSDEDFDQFVKEHSSVLVMFHAPWCGHCKKMKPEFESAAEVLHGEGDSSGVLAAVDAT--VNKALAERFHIAEFPTLKYFKNG----EKYAVPALRTKKSFIEWMRNPESPPPPDPAWEEQQTSVL 402          

HSP 2 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 2
Query:  101 ESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEY 391
            E +  VL L   NF +T+ +    +V FYAPWC HCKK  P +  AA++    D  +  A +D  +E NK+L  Q  ++ +PT     + GK +++Y
Sbjct:  396 EQQTSVLHLSGDNFRETLKRKKHALVMFYAPWCPHCKKAIPHF-TAAADAFKDDRKIACAAIDCVKENNKDLCQQEAVKAYPTFHYY-HYGKFVEKY 490          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: YEU5_SCHPO (Thioredoxin domain-containing protein C13F5.05, mitochondrial OS=Schizosaccharomyces pombe GN=SPAC13F5.05 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.733e-14
Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 2
Query:  119 LTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGK----TIQEYKGPREADGIVEYLKKQSGPASAEIKSAE 475
            + L+  NF   V      +V FYAPWCG+CKKL P Y+K AS L S  P   +  VD + + N+ + SQY+++GFPTIK++    K    +  +Y G R    + +++   S P+  +I ++E
Sbjct:   34 IELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNLHSLLP---VTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFV-SDSIPSKVKILTSE 152          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: PDIA5_MOUSE (Protein disulfide-isomerase A5 OS=Mus musculus GN=Pdia5 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14
Identity = 45/127 (35.43%), Postives = 66/127 (51.97%), Query Frame = 2
Query:  116 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASEL-SSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFI 493
            V  L   +F   V +H+ ++V F+APWCGHCKK+ PE+E AA  L    +   VLA VDA    N+ LA ++ I  FPT+K  +NG +  Q     R     +E+++    P   E    E  +S +
Sbjct:  276 VYHLTDEDFDQFVKEHSSVLVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVDAT--VNEALAGRFHISAFPTLKYFKNGEQ--QAVPALRTKKKFIEWMQNPEAPPPPEPTWEEQQTSVL 398          

HSP 2 Score: 72.4034 bits (176), Expect = 2.767e-12
Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 2
Query:  101 ESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLK 433
            E +  VL L   NF DT+ K    +V FYAPWC HCKK+ P +  A ++    D  +  A VD  ++ N++L  Q  ++ +PT     + GK +++Y+  R   G   +++
Sbjct:  392 EQQTSVLHLVGDNFRDTLKKKKHTLVMFYAPWCPHCKKVIPHF-TATADAFKEDRKIACAAVDCVKDKNQDLCQQEAVKAYPTFHYY-HYGKLVEKYESDRTELGFTSFIR 500          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: EUG1_YEAST (Protein disulfide-isomerase EUG1 OS=Saccharomyces cerevisiae GN=EUG1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14
Identity = 63/198 (31.82%), Postives = 94/198 (47.47%), Query Frame = 2
Query:   17 IMASSRSILALVLTIACCMTAISAEEN---AESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGG-KTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEF 598
            +  ++R I A+V    C   + +  EN   A     +L L    F   +  H  ++VEF+APWC H + L P  E+AAS L  H+ PVV  ++D   EAN  +  Q  I  +PT+KI +NG     Q Y+G +  D I +Y+  Q   AS    ++ED      E   + + +    +G   E Y  +A  L  DY F
Sbjct:    1 MQVTTRFISAIVSF--CLFASFTLAENSARATPGSDLLVLTEKKFKSFIESHPLVLVEFFAPWCLHSQILRPHLEEAASILKEHNVPVV--QIDC--EANSMVCLQQTINTYPTLKIFKNGRIFDGQVYRGVKITDEITQYM-IQLYEASVIYLNSEDEIQPYLENATLPVVINRGLTGLN-ETYQEVALDLAEDYVF 190          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: PDIA5_RAT (Protein disulfide-isomerase A5 OS=Rattus norvegicus GN=Pdia5 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.586e-14
Identity = 45/127 (35.43%), Postives = 66/127 (51.97%), Query Frame = 2
Query:  116 VLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASEL-SSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFI 493
            V  L   +F   V +H+ ++V F+APWCGHCKK+ PE+E AA  L    +   VLA VDA    N+ LA ++ I  FPT+K  +NG +  Q     R     +E+++    P   E    E  +S +
Sbjct:  276 VYHLTDEDFDQFVKEHSSVLVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVDAT--INEALAERFHISAFPTLKYFKNGEQ--QAVPALRTKKKFIEWMQNPEAPPPPEPTWEEQQTSVL 398          

HSP 2 Score: 70.8626 bits (172), Expect = 8.051e-12
Identity = 35/111 (31.53%), Postives = 59/111 (53.15%), Query Frame = 2
Query:  101 ESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLK 433
            E +  VL L   NF +T+ K    +V FYAPWC HCKK+ P +  A ++    D  +  A VD  ++ N++L  Q  ++ +PT     + GK +++Y+  R   G   +++
Sbjct:  392 EQQTSVLHLVGDNFRETLKKKKHTLVMFYAPWCPHCKKVIPHF-TATADAFKDDRKIACAAVDCVKDKNQDLCQQESVKAYPTFHYY-HYGKLVEKYESDRTELGFTSFIR 500          
The following BLAST results are available for this feature:
BLAST of FC925032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ERP44_BOVIN4.125e-1627.13Endoplasmic reticulum resident protein ERp44 OS=Bo... [more]
PDIA6_CAEEL7.037e-1634.19Probable protein disulfide-isomerase A6 OS=Caenorh... [more]
ERP44_HUMAN1.568e-1526.06Endoplasmic reticulum resident protein ERp44 OS=Ho... [more]
Y5025_DICDI2.047e-1542.86Putative protein disulfide-isomerase DDB_G0275025 ... [more]
PDIA5_HUMAN2.674e-1537.98Protein disulfide-isomerase A5 OS=Homo sapiens GN=... [more]
PDIA5_BOVIN5.957e-1536.43Protein disulfide-isomerase A5 OS=Bos taurus GN=PD... [more]
YEU5_SCHPO1.733e-1435.77Thioredoxin domain-containing protein C13F5.05, mi... [more]
PDIA5_MOUSE5.043e-1435.43Protein disulfide-isomerase A5 OS=Mus musculus GN=... [more]
EUG1_YEAST5.043e-1431.82Protein disulfide-isomerase EUG1 OS=Saccharomyces ... [more]
PDIA5_RAT6.586e-1435.43Protein disulfide-isomerase A5 OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YO24FM1 TF Citrus clementina cDNA clone KN0AAP1YO24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925032 ID=FC925032; Name=FC925032; organism=Citrus clementina; type=EST; length=724bp
CTTATTTGCATCGACGATAATGGCGTCCAGTCGATCGATTTTAGCACTCG
TTCTGACGATCGCTTGTTGTATGACGGCGATCTCAGCCGAAGAAAATGCC
GAATCGAAGGAGTTCGTTTTGACTTTGGATCACTCAAACTTCTCTGACAC
TGTCAGTAAACACAATTTCATCGTCGTCGAATTCTACGCGCCTTGGTGTG
GTCACTGTAAAAAGCTAGCTCCAGAGTATGAGAAAGCTGCTTCCGAATTG
AGCAGTCATGACCCTCCGGTTGTTCTTGCGAAAGTTGATGCCAATGAAGA
AGCAAATAAAGAGCTGGCATCTCAATATGAGATTAGGGGTTTCCCCACAA
TTAAGATATTGAGAAATGGAGGAAAAACTATTCAAGAGTACAAAGGACCC
CGCGAGGCCGATGGTATCGTTGAATATTTGAAGAAACAAAGTGGTCCTGC
TTCTGCTGAAATTAAGTCGGCGGAAGATGCTAGTAGTTTCATCGGTGAGA
AGAAAGTGGTCATTATTGGTGTGTTTCCAAATTTCTCTGGAGAGGAGTTT
GAGAACTACACGGCTCTTGCTGAGAAATTGCGTTCTGATTATGAGTTTGG
TCACACTCAACATGCCAAGCTCCTTCCACGTGGGGAGTCATCAGTGACTG
GGCCAGTAGTTAGATTGCTCAAGCCTTTTGATGAACTCTTTTGTTGACTT
TGAGGACTTTTAAAGTGGATGCTC
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