FC925032

Overview
NameFC925032
Unique NameFC925032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14591 contig Ccv1_Contig14591:1..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: PDI2_SCHPO (Protein disulfide-isomerase C17H9.14c OS=Schizosaccharomyces pombe GN=SPAC17H9.14c PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 2
Query:  116 VLTLDHSNFSDTV-SKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQE-YKGPREADGIVEYLKKQSG 445
            V+ LD  NF   V      ++VEFYA WCG+CK+LAP YE    ++  ++P V + K++A+  A  ++   +E+  FPTIK      K   E Y+G R  + ++EY+ K+SG
Sbjct:  142 VVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYE-TLGKVFKNEPNVEIVKINADVFA--DIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250          

HSP 2 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 39/132 (29.55%), Postives = 72/132 (54.55%), Query Frame = 2
Query:  173 VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSG--------PAS-AEIKSAEDASSFIGEKKVVIIGVFPNFSG 541
            ++EFYA WCGHCK LAP YE+  +    H+  V++ K+DA  + + ++A +Y I GFPT+      G    +Y   R+ D + +++ +++G        P++  E+ S       + +KK V++  + ++ G
Sbjct:   43 LIEFYATWCGHCKSLAPVYEELGALFEDHN-DVLIGKIDA--DTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIVLPSNVVELDSLNFDKVVMDDKKDVLVEFYADWCG 171          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: MPD1_YEAST (Protein disulfide-isomerase MPD1 OS=Saccharomyces cerevisiae GN=MPD1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 2
Query:   71 MTAISAEENAESKEFVLTLDHSNFSDTVSKHNFI-VVEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILR 364
            M  + A+   +S   +  L   +F   +   N+  +VEFYAPWCGHCKKL+  + KAA  L   D  V +A V+ +   NK L ++Y++ GFPT+ + R
Sbjct:   16 MNEVKAQNFYDSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRL---DGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFR 111          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: TXNDL_CAEEL (Thioredoxin domain-containing protein C06A6.5 OS=Caenorhabditis elegans GN=C06A6.5 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 46/190 (24.21%), Postives = 88/190 (46.32%), Query Frame = 2
Query:   35 SILALVLTIACCMTAISAEENAESKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASELSSHDP--PVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEF 598
            ++ +++L +A C  ++S   N +  +  + L  +N    +     + V F A WC   ++L P +E++A      +P    V A VD+  +A  ++  +Y +  +PT+K+  NG    +EY+  R  + +  ++K Q   A  E  S +  +  + + K  ++       G EF N   +A  LR D  F
Sbjct:    2 NLASVLLLLAACHLSVSV--NGQEHKEAIELSMANHDHVLGSAQVVFVAFCADWCPFSRRLKPIFEESARVFHQENPQASAVWAIVDSQRQA--DIGDKYFVNKYPTMKVFVNGELITKEYRSTRSVEALTNFVKFQLSTAINEFSSQDQLNQEMDKSKRNVVAWLKK-DGPEFANLKKVASILREDCSF 186          
BLAST of FC925032 vs. ExPASy Swiss-Prot
Match: SEP2_EMIHU (Protein disulfide-isomerase-like protein EhSep2 OS=Emiliania huxleyi GN=SEP2 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 57/212 (26.89%), Postives = 96/212 (45.28%), Query Frame = 2
Query:   71 MTAISAEENAESKEFVLTLDHSNFSDTVSKHNFIV-VEFYAPWCGHCKKLAPEYEKAASELSSHDPPVVLAKVDANEEANKELASQYEIRGFPTIKILRNGGKTIQEYKGPREADGIVEYLKKQSGP---------ASAEIK-SAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQHAKLLPRGESSVTGPVVRLLK 673
            +T + A   A +    LT D  NF + V K      ++F APW GHCKK+ P+++  AS        V++A VD      K L  +Y +RG+PTIK      +  ++YKG R  D + ++ + + GP          S E K   ++      EK+  ++        +    + AL ++L++ Y+    +  KL        + P ++LLK
Sbjct:    6 LTLLCAAAGASAGAIELTPD--NFDELVLKSGKAAFIKFLAPWUGHCKKMKPDWDSLASTFED-SKKVLIADVDCTT-GGKPLCEKYGVRGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGPGCSVDLMDNCSEEQKGKLKEYIDMAPEKRTEMLETLKKELADAESTHEALLKELQATYKESMDKLEKL-----KEESAPKIKLLK 208          
The following BLAST results are available for this feature:
BLAST of FC925032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
PDI2_SCHPO1.467e-1337.50Protein disulfide-isomerase C17H9.14c OS=Schizosac... [more]
MPD1_YEAST7.282e-1337.37Protein disulfide-isomerase MPD1 OS=Saccharomyces ... [more]
TXNDL_CAEEL9.511e-1324.21Thioredoxin domain-containing protein C06A6.5 OS=C... [more]
SEP2_EMIHU1.242e-1226.89Protein disulfide-isomerase-like protein EhSep2 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YO24FM1 TF Citrus clementina cDNA clone KN0AAP1YO24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925032 ID=FC925032; Name=FC925032; organism=Citrus clementina; type=EST; length=724bp
CTTATTTGCATCGACGATAATGGCGTCCAGTCGATCGATTTTAGCACTCG
TTCTGACGATCGCTTGTTGTATGACGGCGATCTCAGCCGAAGAAAATGCC
GAATCGAAGGAGTTCGTTTTGACTTTGGATCACTCAAACTTCTCTGACAC
TGTCAGTAAACACAATTTCATCGTCGTCGAATTCTACGCGCCTTGGTGTG
GTCACTGTAAAAAGCTAGCTCCAGAGTATGAGAAAGCTGCTTCCGAATTG
AGCAGTCATGACCCTCCGGTTGTTCTTGCGAAAGTTGATGCCAATGAAGA
AGCAAATAAAGAGCTGGCATCTCAATATGAGATTAGGGGTTTCCCCACAA
TTAAGATATTGAGAAATGGAGGAAAAACTATTCAAGAGTACAAAGGACCC
CGCGAGGCCGATGGTATCGTTGAATATTTGAAGAAACAAAGTGGTCCTGC
TTCTGCTGAAATTAAGTCGGCGGAAGATGCTAGTAGTTTCATCGGTGAGA
AGAAAGTGGTCATTATTGGTGTGTTTCCAAATTTCTCTGGAGAGGAGTTT
GAGAACTACACGGCTCTTGCTGAGAAATTGCGTTCTGATTATGAGTTTGG
TCACACTCAACATGCCAAGCTCCTTCCACGTGGGGAGTCATCAGTGACTG
GGCCAGTAGTTAGATTGCTCAAGCCTTTTGATGAACTCTTTTGTTGACTT
TGAGGACTTTTAAAGTGGATGCTC
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