FC925037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_ANADF (V-type ATP synthase beta chain OS=Anaeromyxobacter sp. (strain Fw109-5) GN=atpB PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.170e-32 Identity = 72/168 (42.86%), Postives = 100/168 (59.52%), Query Frame = 3 Query: 159 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 V R +AGPL+ L+ V + E+V IR+ G RRGQ++E+ G + VQV E T G+ V TGEV VS MLGR+ +G G+P D P + EA L I G+++N + R P + I+TG+S ID +N++ RGQK+P+FS AGLP +A QI QA Sbjct: 4 VTRRVRGADAIAGPLLFLEGVPRARLGELVRIRMAGGEERRGQIIELSGARVAVQVLEETRGLAPARAEVTLTGEVATLAVSRGMLGRVLDGLGRPTDGLPAPIAEARLPIHGAALNVTRREKPADFIETGVSAIDGLNTLVRGQKLPVFSCAGLPAGRLAGQIVCQA 171
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB2_TREPA (V-type ATP synthase beta chain 2 OS=Treponema pallidum GN=atpB2 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.086e-31 Identity = 67/167 (40.12%), Postives = 104/167 (62.28%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLV 671 YR ++ + GP+V+ + +G Y EI IR G +R G+++++ E ++QVF T G+ ++F ++ V ++GR+F+G G+PID P +L +++G INP R YP + IQTGIS ID MN++ RGQK+P+FS GL HN +AAQI RQA ++ Sbjct: 6 YRGLSSIDGPIVVAKRREGAFYGEITAIRDRFGALRTGRIIDLSQECCLIQVFGSTLGLSLDGACLEFLDVPMQLRVCEGLMGRVFDGLGRPIDGFPEVLSSQLRNVNGYPINPYARVYPRDFIQTGISAIDGMNTLIRGQKLPIFSGNGLAHNRLAAQIIRQAKIL 172
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_METTL (V-type ATP synthase beta chain (Fragment) OS=Methanococcus thermolithotrophicus GN=atpB PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.647e-31 Identity = 69/125 (55.20%), Postives = 85/125 (68.00%), Query Frame = 3 Query: 360 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734 T V+FTGE K VSL+MLGRIFNG+GKPID GP I+PE LDI+G +NP R P +QTGISTID N++ RGQK+P+FS +GLPHN +AAQI RQA + GE + FA+V Sbjct: 5 TKVRFTGETAKIGVSLEMLGRIFNGAGKPIDGGPEIIPEKKLDINGYPLNPVSRNPPNAFVQTGISTIDGTNTLVRGQKLPIFSGSGLPHNTLAAQIARQAKV------------RGEGEQFAVV 117
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_ANASK (V-type ATP synthase beta chain OS=Anaeromyxobacter sp. (strain K) GN=atpB PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.350e-29 Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = 3 Query: 159 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGD-------GTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 V R G+AGPL+ L+ V + E+V IR G+ R GQV+ + ++ VQV E T G+ V TG+V + VS MLGR+ +G G+P D PP +PEA I G+++N + R P + I+TG+S ID MN++ RGQK+P+FS AGLP + +AAQI QA Sbjct: 4 VTRRIRGALGIAGPLLFLEGVPRARLGEVVRIR-GEPEAHGRAAEERSGQVIALSRDRIAVQVLEETRGLAPARAEVTLTGQVARLGVSRGMLGRVLDGLGRPADGLPPPVPEARPAIHGAALNVTRREKPSDFIETGVSAIDGMNTLVRGQKLPVFSCAGLPASRLAAQIVCQA 177
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_ANAD2 (V-type ATP synthase beta chain OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=atpB PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.350e-29 Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = 3 Query: 159 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGD-------GTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 V R G+AGPL+ L+ V + E+V IR G+ R GQV+ + ++ VQV E T G+ V TG+V + VS MLGR+ +G G+P D PP +PEA I G+++N + R P + I+TG+S ID MN++ RGQK+P+FS AGLP + +AAQI QA Sbjct: 4 VTRRIRGALGIAGPLLFLEGVPRARLGEVVRIR-GEPEANGRAAEERSGQVIALSRDRIAVQVLEETRGLAPARAEVTLTGQVARLGVSRGMLGRVLDGLGRPADGLPPPVPEARPAIHGAALNVTRREKPSDFIETGVSAIDGMNTLVRGQKLPVFSCAGLPASRLAAQIVCQA 177
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_ANADE (V-type ATP synthase beta chain OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=atpB PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.420e-29 Identity = 72/175 (41.14%), Postives = 104/175 (59.43%), Query Frame = 3 Query: 159 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGD-------GTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 V R G+AGPL+ L+ V + E+V IR G+ R GQV+ + ++ VQV E T G+ + V TG+V + V+ MLGR+ +G G+P D PP +PEA I G+++N + R P + I+TG+S ID MN++ RGQK+P+FS AGLP + +AAQI QA Sbjct: 4 VTRRIRGALGIAGPLLFLEGVPRARLGEVVRIR-GEPEASGRAAEERSGQVIALSRDRIAVQVLEETRGLAPARSEVTLTGQVARLGVARGMLGRVLDGLGRPADGLPPPVPEARPAIHGAALNVTRREKPSDFIETGVSAIDGMNTLVRGQKLPVFSCAGLPASRLAAQIVCQA 177
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_BORAP (V-type ATP synthase beta chain OS=Borrelia afzelii (strain PKo) GN=atpB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.811e-25 Identity = 61/164 (37.20%), Postives = 99/164 (60.37%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 Y + +AG ++ + +G KY E+ ++ D T +V+++D EK +QV+ GT G+ ++F G ++ S ++LGRIF+GSG P D GP L + ++I G S NP++R P MI+TG+ IDV N++ QK+P+FS +G P+NE+ +I QA Sbjct: 5 YSKIESIAGNVITVT-AQGIKYGELAIVKAKD-TSSLAEVIKLDREKVSLQVYGGTRGVSTS-DEIKFLGHTMQVSFSDNLLGRIFDGSGNPRDGGPS-LDDNLIEIGGPSANPTKRIVPRNMIRTGLPMIDVFNTLVESQKLPIFSVSGEPYNELLVRIALQA 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_BORBZ (V-type ATP synthase beta chain OS=Borrelia burgdorferi (strain ZS7) GN=atpB PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.489e-25 Identity = 61/164 (37.20%), Postives = 99/164 (60.37%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 Y + +AG ++ + +G KY E+ ++ D T +V+++D EK +QV+ GT G+ ++F G ++ S ++LGRIF+GSG P D GP L + ++I G S NP++R P MI+TG+ IDV N++ QK+P+FS +G P+NE+ +I QA Sbjct: 5 YSKIESIAGNVITVT-AQGIKYGELAIVKAKD-TSSLAEVIKLDREKVSLQVYGGTRGVSTS-DEIKFLGHSMQVSFSDNLLGRIFDGSGNPRDGGPS-LDDNLIEIGGPSANPTKRIVPRNMIRTGLPMIDVFNTLVESQKLPIFSVSGEPYNELLIRIALQA 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_BORBU (V-type ATP synthase beta chain OS=Borrelia burgdorferi GN=atpB PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.489e-25 Identity = 61/164 (37.20%), Postives = 99/164 (60.37%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 Y + +AG ++ + +G KY E+ ++ D T +V+++D EK +QV+ GT G+ ++F G ++ S ++LGRIF+GSG P D GP L + ++I G S NP++R P MI+TG+ IDV N++ QK+P+FS +G P+NE+ +I QA Sbjct: 5 YSKIESIAGNVITVT-AQGIKYGELAIVKAKD-TSSLAEVIKLDREKVSLQVYGGTRGVSTS-DEIKFLGHSMQVSFSDNLLGRIFDGSGNPRDGGPS-LDDNLIEIGGPSANPTKRIVPRNMIRTGLPMIDVFNTLVESQKLPIFSVSGEPYNELLIRIALQA 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_BORGA (V-type ATP synthase beta chain OS=Borrelia garinii GN=atpB PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.448e-24 Identity = 62/164 (37.80%), Postives = 99/164 (60.37%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 Y + +AG ++ + +G KY E+ ++ D T +V+++D EK +QV+ GT GI ++F G ++ S ++LGRIF+GSG P D GP L + ++I G S NP++R P MI+TG+ IDV N++ QK+P+FS +G P+NE+ +I QA Sbjct: 5 YSKIECIAGNVITVT-AQGIKYGELAIVKAKD-TSSLAEVIKLDREKVSLQVYGGTRGISTS-DEIKFLGHSMQVSFSDNLLGRIFDGSGNPRDGGPS-LDDNLIEIGGPSANPAKRIVPRNMIRTGLPMIDVFNTLVESQKLPIFSVSGEPYNELLLRIALQA 164 The following BLAST results are available for this feature:
BLAST of FC925037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925037 ID=FC925037; Name=FC925037; organism=Citrus clementina; type=EST; length=736bpback to top |