FC925037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_BORHD (V-type ATP synthase beta chain OS=Borrelia hermsii (strain DAH) GN=atpB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.386e-24 Identity = 60/164 (36.59%), Postives = 97/164 (59.15%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 Y + + G ++ + + KY E+ ++ D T +V+++D EK +QV+ GT GI V+F G ++ S ++ GRIF+G+G P D GP L + ++I G S+NP++R P MI+TGI IDV N++ QK+P+FS +G P+NE+ +I QA Sbjct: 5 YSKIESIVGNVITV-MAQNVKYGELAIVKSKD-TSSLAEVIKLDREKVSLQVYNGTIGISTA-DEVKFLGHPMQVTFSENLFGRIFDGAGNPKDGGPR-LEDNLIEIGGPSVNPAKRIVPRNMIRTGIPMIDVFNTLVESQKLPVFSVSGEPYNELLVRIALQA 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_TREDE (V-type ATP synthase beta chain OS=Treponema denticola GN=atpB PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.601e-23 Identity = 62/164 (37.80%), Postives = 97/164 (59.15%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 Y + + G ++ + K G Y E+ ++ G +V +++G+ +QVF G G+ V+F G+ ++ S D+LGRIFNGSG P D+GP L + + I G S+NPS+R MI+TGI IDV N++ QK+P+FS++G P+NE+ A+I QA Sbjct: 5 YSKIESINGSVITV-KADGVSYGELAEVQTRFGASL-AEVNKLEGDLVSLQVFAGGRGVSTG-DEVRFLGKEMQVSYSEDLLGRIFNGSGDPRDSGPA-LKDNMIPIGGPSVNPSKRILANRMIRTGIPMIDVFNTLVVSQKLPIFSSSGEPYNELLARIAMQA 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_BORT9 (V-type ATP synthase beta chain OS=Borrelia turicatae (strain 91E135) GN=atpB PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.091e-23 Identity = 60/164 (36.59%), Postives = 97/164 (59.15%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 Y + + G ++ + + KY E+ +R D + +V+++D +K +QV+ GT GI V+F G ++ S ++LGRIF+G+G P D GP L + ++I G S NP++R P MI+TGI IDV N++ QK+P+FS +G P+NE+ +I QA Sbjct: 5 YSKIESIVGNVITV-MAQNVKYGELAIVRSKDSSSL-AEVIKLDRDKVSLQVYNGTIGISTA-DEVKFLGHPMQVTFSENLLGRIFDGAGNPKDGGPR-LEDDLIEIGGPSANPAKRIVPRNMIRTGIPMIDVFNTLVESQKLPIFSVSGEPYNELLIRIALQA 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB1_TREPA (V-type ATP synthase beta chain 1 OS=Treponema pallidum GN=atpB1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23 Identity = 62/164 (37.80%), Postives = 96/164 (58.54%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 Y + + G ++ + + KG Y E+ ++ G +V +++G+ +QVF G GI + V+F G + S +LGRIFNGSG P D GP L E ++I G S+NP++R MI+TGI IDV N++ QK+P+FS++G P+NE+ A+I QA Sbjct: 5 YEKIESINGSVITV-RAKGVHYGELARVKTAFGDSL-AEVNKLEGDVVSLQVFAGGRGISTG-SEVRFLGRGMLVSFSDYLLGRIFNGSGVPRDGGPA-LKEGRVEIGGPSVNPAKRVIARRMIRTGIPMIDVFNTLVVSQKLPIFSSSGEPYNELLARIAMQA 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_CHLMU (V-type ATP synthase beta chain OS=Chlamydia muridarum GN=atpB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.147e-21 Identity = 61/163 (37.42%), Postives = 87/163 (53.37%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 659 Y +T + G L+ ++ +G E+V I DG VL D +K +QVF GTSG+ V F G ++ +LGR FNG+GKPIDN E + I+ S NP R P EM++T I ID+ N + + QKIP+FS++G HN + +I Q Sbjct: 5 YTRITDIKGNLITVE-AEGASLGELVQIERADGRSSYASVLRFDAKKVTLQVFGGTSGLSTGDKVV-FLGRPMEVVYGDSLLGRRFNGTGKPIDNEEICFGEP-IPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNALLMRIAAQ 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_PARUW (V-type ATP synthase beta chain OS=Protochlamydia amoebophila (strain UWE25) GN=atpB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.498e-21 Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 659 Y + + G L+ + +G E+ I L DG VL +DG++ +QVF+ T GI V F ++ +LGR +G+G PID GP ++ E+ +DI +S NP +R P +M++T I IDV N + + QKIP+FS G P+N + +I Q Sbjct: 5 YDRINNMRGNLITIT-AEGVSLGELARIDLKDGRNIYASVLRIDGDQVTLQVFQTTRGISTS-DQVTFLNRQMQAVYGDTLLGRRLSGTGLPIDGGPQVIGES-IDIGSTSFNPVKRIVPRDMVRTNIPMIDVFNCLVKSQKIPIFSVPGEPYNALLMRIANQ 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_CHLTB (V-type ATP synthase beta chain OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=atpB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.694e-21 Identity = 59/163 (36.20%), Postives = 86/163 (52.76%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 659 Y +T + G L+ ++ +G E+V I DG VL D K +QVF GTSG+ + F G ++ +LGR FNG+GKPID+ E + I+ S NP R P EM++T I ID+ N + + QKIP+FS++G HN + +I Q Sbjct: 5 YTKITDIKGNLITVE-AEGASLGELVQIERADGRSSYASVLRFDARKVTLQVFGGTSGLSTGDKVI-FLGRPMEVIYGDSLLGRRFNGTGKPIDHEDECFGEP-IPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNALLMRIAAQ 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_CHLT2 (V-type ATP synthase beta chain OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=atpB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.694e-21 Identity = 59/163 (36.20%), Postives = 86/163 (52.76%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 659 Y +T + G L+ ++ +G E+V I DG VL D K +QVF GTSG+ + F G ++ +LGR FNG+GKPID+ E + I+ S NP R P EM++T I ID+ N + + QKIP+FS++G HN + +I Q Sbjct: 5 YTKITDIKGNLITVE-AEGASLGELVQIERADGRSSYASVLRFDARKVTLQVFGGTSGLSTGDKVI-FLGRPMEVIYGDSLLGRRFNGTGKPIDHEDECFGEP-IPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNALLMRIAAQ 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_CHLTR (V-type ATP synthase beta chain OS=Chlamydia trachomatis GN=atpB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.437e-21 Identity = 59/163 (36.20%), Postives = 85/163 (52.15%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 659 Y +T + G L+ ++ +G E+V I DG VL D K +QVF GTSG+ + F G ++ +LGR FNG+GKPID E + I+ S NP R P EM++T I ID+ N + + QKIP+FS++G HN + +I Q Sbjct: 5 YTKITDIKGNLITVE-AEGASLGELVQIERADGRSSYASVLRFDARKVTLQVFGGTSGLSTGDKVI-FLGRPMEVIYGDSLLGRRFNGTGKPIDREDECFGEP-IPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNALLMRIAAQ 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_CHLTA (V-type ATP synthase beta chain OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=atpB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.437e-21 Identity = 59/163 (36.20%), Postives = 85/163 (52.15%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 659 Y +T + G L+ ++ +G E+V I DG VL D K +QVF GTSG+ + F G ++ +LGR FNG+GKPID E + I+ S NP R P EM++T I ID+ N + + QKIP+FS++G HN + +I Q Sbjct: 5 YTKITDIKGNLITVE-AEGASLGELVQIERADGRSSYASVLRFDARKVTLQVFGGTSGLSTGDKVI-FLGRPMEVIYGDSLLGRRFNGTGKPIDREDECFGEP-IPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNALLMRIAAQ 164 The following BLAST results are available for this feature:
BLAST of FC925037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925037 ID=FC925037; Name=FC925037; organism=Citrus clementina; type=EST; length=736bpback to top |