FC925037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_CHLPN (V-type ATP synthase beta chain OS=Chlamydia pneumoniae GN=atpB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.820e-20 Identity = 58/163 (35.58%), Postives = 85/163 (52.15%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 659 Y +T + G L+ ++ +G + E+ I DG VL D +K +QVF GTSG+ V F G ++ +LGR NG GKPIDN E ++I+ + NP R P M++T I IDV N + + QKIP+FS++G HN + +I Q Sbjct: 5 YTKITDIKGNLITVE-AEGARLGELATITRSDGRSSYASVLRFDLKKVTLQVFGGTSGLSTG-DHVTFLGRPMEVTFGSSLLGRRLNGIGKPIDNEGECFGEP-IEIATPTFNPVCRIVPRSMVRTNIPMIDVFNCLVKSQKIPIFSSSGEHHNALLMRIAAQ 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_CHLAB (V-type ATP synthase beta chain OS=Chlamydophila abortus GN=atpB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.074e-19 Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 659 Y +T + G L+ ++ +G + E+ I DG VL D +K +QVF GTSG+ V F G ++ ++GR NG GKPID + ++IS + NP R P +M++T I IDV N + + QKIP+FS++G HN + +I Q Sbjct: 5 YTKITDIKGNLITVE-AEGARLGELAEIERVDGRSSYASVLRFDAKKVTLQVFGGTSGLSTGDRVV-FLGRSMEVTYGESLIGRRLNGVGKPIDGEGECFGDP-IEISTPTFNPVCRVVPRDMVRTNIPMIDVFNCLVKSQKIPIFSSSGEKHNALLMRIAAQ 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_CHLCV (V-type ATP synthase beta chain OS=Chlamydophila caviae GN=atpB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.124e-19 Identity = 58/168 (34.52%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDN-----GPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 659 Y +T + G L+ ++ +G + E+ I DG VL D +K +QVF GTSG+ + F G ++ ++GR NG GKPID G PI IS + NP R P +M++T I IDV N + + QKIP+FS++G HN + +I Q Sbjct: 5 YTKITDIKGNLITVE-AEGARLGELAEIERVDGRSSYASVLRFDAKKVTLQVFGGTSGLSTGDRVI-FLGRSMEVTYGESLIGRRLNGVGKPIDGEGECFGDPIA------ISTPTFNPVCRVVPRDMVKTNIPMIDVFNCLVKSQKIPIFSSSGESHNALLMRIAAQ 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_CHLFF (V-type ATP synthase beta chain OS=Chlamydophila felis (strain Fe/C-56) GN=atpB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.645e-18 Identity = 56/168 (33.33%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 171 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDN-----GPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ 659 Y +T + G L+ ++ +G + E+ I DG VL D +K +QVF GTSG+ + F G ++ ++GR +G GKPID G PI IS + NP R P +M++T I ID+ N + + QKIP+FS++G HN + +I Q Sbjct: 5 YTKITDIKGNLITVE-AEGARLGELAEIERVDGRSSYASVLRFDAKKVTLQVFGGTSGLSTGDRVI-FLGRAMEVTYGESLIGRRLSGIGKPIDGEGECFGDPIA------ISTPTFNPVCRIVPRDMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNALLMRIAAQ 164
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_CLOCE (ATP synthase subunit beta OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=atpD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.370e-13 Identity = 45/161 (27.95%), Postives = 77/161 (47.83%), Query Frame = 3 Query: 180 VTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICR 656 + V GP++ + G P Y + I GT+ + + + T G+ + TG+ + PV ++LGRIFN G+P+D P+ P AYL I + + E+ E+++TGI +D++ A+G KI LF AG+ + ++ R Sbjct: 8 IVQVIGPVLDIRFENGILPDIYNAIKIPADSGTVTAEVMQHLGNDTVRCVAMSSTDGLVRGMKA-EDTGDAITVPVGKEVLGRIFNVLGEPVDKAGPVEPTAYLPIHREAPSLEEQRPSTEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIR 167
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: FLII_BUCAI (Flagellum-specific ATP synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=fliI PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.735e-13 Identity = 44/129 (34.11%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 285 QVLEVDGEKAVVQVFEGTSGI---DNKFTTVQFTGE--VLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICR 656 +V+ GEK + FE GI F+ + + K P+ +++LGR+ +G G+P+D P I + Y I SINP RT E++ TGI I+ + +I RGQKI +FS++G+ + + I R Sbjct: 82 EVIGFSGEKTFLLSFEDIHGIFPGARVFSKIASNSNFFIKKLPLGMELLGRVLDGRGQPLDQLPKIDHKYYSTIKNYSINPLNRTPITEVLDTGIRAINGLLTIGRGQKIGIFSSSGIGKSILLGMIAR 210
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_CLOTH (ATP synthase subunit beta OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12 Identity = 50/163 (30.67%), Postives = 80/163 (49.08%), Query Frame = 3 Query: 177 TVTGVAGPLVIL--DKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICR 656 TV + GP++ + ++ K P Y + I +G +V++ G V V T G+ V TGE +K PV ++LGR+FN G+PID + YL I + E+ E+++TGI ID++ A+G KI LF AG+ + ++ R Sbjct: 8 TVVQIIGPVIDIRFERGKLPSIYNAIKIN-SEGIDIVAEVMQYTGNDTVRCVSMNSTDGLKRGMKAVD-TGEPIKVPVGKEVLGRVFNVLGEPIDGKGDVKATTYLPIHREAPGLDEQKPVTEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIR 168
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_LACRJ (ATP synthase subunit beta OS=Lactobacillus reuteri (strain JCM 1112) GN=atpD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11 Identity = 50/153 (32.68%), Postives = 76/153 (49.67%), Query Frame = 3 Query: 180 VTGVAGPLVILD---KVKGPKYYEIVNIRLGDG-TMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA-YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 V V GP+V ++ K P+ + + I+ DG T+ LE+ +GT G+ V+ TG + PV D LGR+FN G+P+DNGP P+A + I + + E+++TGI ID++ RG KI LF AG+ Sbjct: 6 VLQVIGPVVDVEFPLDEKLPEINDALKIKESDGKTLTTEVALELGDGVVRTIAMDGTDGLQRGME-VENTGASISVPVGDDTLGRVFNVLGEPVDNGPKFGPDAKRMPIHRDAPKYDDLNNATEILETGIKVIDLLAPYVRGGKIGLFGGAGV 157
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_LACRD (ATP synthase subunit beta OS=Lactobacillus reuteri (strain DSM 20016) GN=atpD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11 Identity = 50/153 (32.68%), Postives = 76/153 (49.67%), Query Frame = 3 Query: 180 VTGVAGPLVILD---KVKGPKYYEIVNIRLGDG-TMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA-YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 V V GP+V ++ K P+ + + I+ DG T+ LE+ +GT G+ V+ TG + PV D LGR+FN G+P+DNGP P+A + I + + E+++TGI ID++ RG KI LF AG+ Sbjct: 6 VLQVIGPVVDVEFPLDEKLPEINDALKIKESDGKTLTTEVALELGDGVVRTIAMDGTDGLQRGME-VENTGASISVPVGDDTLGRVFNVLGEPVDNGPKFGPDAKRMPIHRDAPKYDDLNNATEILETGIKVIDLLAPYVRGGKIGLFGGAGV 157
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: HRPB6_XANEU (Probable ATP synthase hrpB6 OS=Xanthomonas euvesicatoria GN=hrpB6 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11 Identity = 49/181 (27.07%), Postives = 88/181 (48.62%), Query Frame = 3 Query: 123 QNNVDMEEGTLEVAMEYRTVTGVAGPLVILDKVKGPKYY--EIVNIRLGDGTM-RRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICR 656 + ++ E TL V Y V V G ++ KV G + E+ +R DGT+ +R +V+ + A++ F G+ + T V G L PV +LGR+ +G G+P D I + ++ I + +P R E + TG+ +D + ++ GQ++ +F+AAG+ + + R Sbjct: 9 ETTLERELATLAVGRRYGKVVEVVGTML---KVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGELIGLSRE-TRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFAR 185 The following BLAST results are available for this feature:
BLAST of FC925037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925037 ID=FC925037; Name=FC925037; organism=Citrus clementina; type=EST; length=736bpback to top |