FC925037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_CHLLI (ATP synthase subunit beta OS=Chlorobium limicola GN=atpD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 55/208 (26.44%), Postives = 99/208 (47.60%), Query Frame = 3 Query: 165 MEYRTVTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ-----------AGLVKRLEKTDNL----LEDGEEDNFAIV 734 M+ ++ + GP+V +D +G P + + + DG+ + + GE+ V ++ EGT G+ + TG+ ++ PV ++LGR+ N G PID P+L + I ++ E + EM +TGI ID++ +RG K LF AG+ + ++ AG+ +R + ++L +E G D A+V Sbjct: 1 MQEGKISQIIGPVVDVDFAEGQLPSILDALTVTRQDGSKLVLETQQHLGEERVRRIAMEGTDGLVRGMSAKN-TGKPIQVPVGEEVLGRMLNVVGDPIDGKGPVLSKKSYSIHRTAPKFDELSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKEQSGFSVFAGVGERTREGNDLWHEMMESGVIDKTALV 207
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_THICR (ATP synthase subunit beta OS=Thiomicrospira crunogena (strain XCL-2) GN=atpD PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11 Identity = 46/151 (30.46%), Postives = 77/151 (50.99%), Query Frame = 3 Query: 180 VTGVAGPLVILDKVKG---PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 + + GP++ ++ KG PK Y+ + + D T+ +V + G+ V + G+S + V TGE + PV LGRIF+ G PIDN P+ E + I + E +E+++TG+ ID++ A+G K+ LF AG+ Sbjct: 5 IVQIIGPVIDVE-FKGADLPKIYDALKVDELDLTL---EVQQQVGDNVVRAIAMGSSDGLKRGMAVSNTGEAISVPVGKPTLGRIFDVLGNPIDNAGPVESEEKMTIHRPAPAFDELAASQELLETGVKVIDLICPFAKGGKVGLFGGAGV 151
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_PELPB (ATP synthase subunit beta OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=atpD PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11 Identity = 60/208 (28.85%), Postives = 98/208 (47.12%), Query Frame = 3 Query: 165 MEYRTVTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHN----EIAAQICRQ-------AGLVKRLEKTDNL----LEDGEEDNFAIV 734 M+ ++ + GP+V +D +G P + + + DGT + + GE+ V V E T G+ V TG+ ++ PV L++LGR+ N G PID P+ + I + E + EM +TGI ID++ +RG K LF AG+ E+ I +Q AG+ +R + ++L +E G D A+V Sbjct: 1 MQEGKISQIIGPVVDVDFPEGRLPSILDALTVTRADGTKLVLETQQHLGEERVRTVAMESTDGLVRGMN-VTHTGKPIQVPVGLEVLGRMLNVVGDPIDGRGPVNTKKSYSIHRLAPRFDEISTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFSVFAGVGERTREGNDLWHEMMESGVIDKTALV 207
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_CLOBB (ATP synthase subunit beta OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=atpD PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11 Identity = 47/150 (31.33%), Postives = 69/150 (46.00%), Query Frame = 3 Query: 180 VTGVAGPLVIL--DKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 V V GP+V + D P Y ++I +G+ T+ V + E T G+ V T + + PV +LGR+FN GKPIDN + E I + + ++ EM +TGI ID++ RG KI LF AG+ Sbjct: 8 VVQVIGPVVDIKFDSDSLPNLYNAISIDMGERTLIAEVEQHVGDDIVRTIAMEATEGLKRGMDAVD-TEKAISVPVGDQVLGRLFNVLGKPIDNAGEVEAEEIYPIHRPAPSFKDQAVEPEMFETGIKVIDLLAPYQRGGKIGLFGGAGV 156
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_CLOAB (ATP synthase subunit beta OS=Clostridium acetobutylicum GN=atpD PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11 Identity = 47/151 (31.13%), Postives = 73/151 (48.34%), Query Frame = 3 Query: 180 VTGVAGPLVIL--DKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 + V GP+V + D P Y + I +GD +V + G+ V + EGT G+ V TG+ + PV ++LGR+FN G+ ID + + Y I + E++ EM +TGI ID++ +G KI LF AG+ Sbjct: 8 IVQVIGPVVDIKFDAENLPDIYNSIEIDMGDNKKLIAEVEQHVGDDIVRTIAMEGTDGLKRGMEAVN-TGKPISVPVGENVLGRLFNVLGQTIDEAGDMNADKYYPIHRPAPTFEEQSVQPEMFETGIKVIDLLAPYQKGGKIGLFGGAGV 157
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB2_CHLTE (ATP synthase subunit beta 2 OS=Chlorobium tepidum GN=atpD2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11 Identity = 58/208 (27.88%), Postives = 100/208 (48.08%), Query Frame = 3 Query: 165 MEYRTVTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHN----EIAAQICRQ-------AGLVKRLEKTDNL----LEDGEEDNFAIV 734 M+ ++ + GP+V +D +G P + + + DG+ + + GE+ V + EGT G+ + V TG+ ++ PV ++LGR+ N G PID P+ + I ++ E + EM +TGI ID++ +RG K LF AG+ E+ I +Q AG+ +R + ++L +E G D A+V Sbjct: 1 MQEGKISQIIGPVVDVDFPEGQLPSILDALTVTRQDGSKLVLETQQHLGEERVRTIAMEGTDGLVRGMSAVN-TGKPIQVPVGGEVLGRMLNVVGDPIDGKGPVPAKKTYSIHRAAPKFDELSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKTALV 207
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: FLII_BORBU (Flagellum-specific ATP synthase OS=Borrelia burgdorferi GN=fliI PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11 Identity = 39/128 (30.47%), Postives = 70/128 (54.69%), Query Frame = 3 Query: 285 QVLEVDGEKAVVQVFEGTSGID--NKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 662 +VL +G + +EG SGI+ NK V + L+ +S ++LGR+ + G+PIDN L +Y ++ INP R+ E+ I TG+ +D +A+GQ++ +FS +G+ + + I + + Sbjct: 58 EVLGFNGPYVSLMAYEGFSGIEVGNK---VYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINPINRSIFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNS 182
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_CLOPS (ATP synthase subunit beta OS=Clostridium perfringens (strain SM101 / Type A) GN=atpD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11 Identity = 48/151 (31.79%), Postives = 75/151 (49.67%), Query Frame = 3 Query: 180 VTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 V V GP+V + P + ++I++ DG + +V + G+ V + E T G+ V TG + PV +LGRIFN GKP+D+G + E I + + E++ +M +TGI ID++ RG KI LF AG+ Sbjct: 8 VVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAMEATEGLRRGVEAVD-TGAPISVPVGECVLGRIFNVLGKPLDSGAEVNNEEKYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGV 157
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_CLOPE (ATP synthase subunit beta OS=Clostridium perfringens GN=atpD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11 Identity = 48/151 (31.79%), Postives = 75/151 (49.67%), Query Frame = 3 Query: 180 VTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 V V GP+V + P + ++I++ DG + +V + G+ V + E T G+ V TG + PV +LGRIFN GKP+D+G + E I + + E++ +M +TGI ID++ RG KI LF AG+ Sbjct: 8 VVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAMEATEGLRRGVEAVD-TGAPISVPVGECVLGRIFNVLGKPLDSGAEVNNEEKYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGV 157
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_CLOP1 (ATP synthase subunit beta OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=atpD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11 Identity = 48/151 (31.79%), Postives = 75/151 (49.67%), Query Frame = 3 Query: 180 VTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 V V GP+V + P + ++I++ DG + +V + G+ V + E T G+ V TG + PV +LGRIFN GKP+D+G + E I + + E++ +M +TGI ID++ RG KI LF AG+ Sbjct: 8 VVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAMEATEGLRRGVEAVD-TGAPISVPVGECVLGRIFNVLGKPLDSGAEVNNEEKYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGV 157 The following BLAST results are available for this feature:
BLAST of FC925037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925037 ID=FC925037; Name=FC925037; organism=Citrus clementina; type=EST; length=736bpback to top |